RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 FRMD3A2A2Y4 597 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 BCRP11274 1271 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 PGM5Q15124 567 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 AADACL2Q6P093 401 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 GADL1Q6ZQY3 521 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 ZNF720Q7Z2F6 126 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 REPS2Q8NFH8 660 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 SLC20A1Q8WUM9 679 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 GLG1Q92896 1179 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.326e-9■□□□□ 9.3
CAPRIN1-202ENST00000389645 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 CSADQ9Y600 493 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 DICER1Q9UPY3 1922 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 SPDYE16A6NNV3 312 aaPredicted RBP13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 MTMR1Q13613 665 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 C1orf186Q6ZWK4 172 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 KAT5Q92993 513 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 PBKQ96KB5 322 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 PLCB1Q9NQ66 1216 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 DONSONQ9NYP3 566 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 FBXL5Q9UKA1 691 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 SNX24Q9Y343 169 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 TELO2Q9Y4R8 837 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 PPP2R3BQ9Y5P8 575 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 F8VZ95 297 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 FTLP02792 175 aaPredicted RBP13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 HARSP12081 509 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 EPHX2P34913 555 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 SOX10P56693 466 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 SATB1Q01826 763 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 PDCD2LQ9BRP1 358 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 STK24Q9Y6E0 443 aa13.04□□□□□ -0.32
CAPRIN1-202ENST00000389645 MAGEA9P43362 315 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 BFSP1Q12934 665 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 LRRC45Q96CN5 670 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 ARHGEF26Q96DR7 871 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 PXMP2Q9NR77 195 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 APEX2Q9UBZ4 518 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 VPS41P49754 854 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 MARSP56192 900 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 C10orf76Q5T2E6 689 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 LNX1Q8TBB1 728 aaPredicted RBP13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 CDCA5Q96FF9 252 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 BTBD6Q96KE9 485 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 SELENOSQ9BQE4 189 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 TUFT1Q9NNX1 390 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 USP20Q9Y2K6 914 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 RPTORQ8N122 1335 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 ZNF233A6NK53 670 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 SSTR3P32745 418 aaPredicted RBP13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 FSTL1Q12841 308 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 EPC2Q52LR7 807 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 STK33Q9BYT3 514 aa13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 NOVA2Q9UNW9 492 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-202ENST00000389645 SLC16A3O15427 465 aaKnown RBP13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 CALCAP01258 141 aa13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 MXI1P50539 228 aa13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 LMBRD2Q68DH5 695 aaPredicted RBP13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 WHAMMQ8TF30 809 aa13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 AGO4Q9HCK5 861 aaKnown RBP13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 OLFML3Q9NRN5 406 aa13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 NR2E1Q9Y466 385 aa13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 UBIAD1Q9Y5Z9 338 aa13.02□□□□□ -0.32
CAPRIN1-202ENST00000389645 SLCO1A2P46721 670 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 VAMP7P51809 220 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 CNTN2Q02246 1040 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 ITIH3Q06033 890 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 C2CD6Q53TS8 623 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 NOL9Q5SY16 702 aaKnown RBP13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 MAGOHBQ96A72 148 aaKnown RBP13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
CAPRIN1-202ENST00000389645 CYP26A1O43174 497 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 NR3C2P08235 984 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 TMOD1P28289 359 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 FLT3P36888 993 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 SETQ01105 290 aaPredicted RBP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 EPM2AIP1Q7L775 607 aaPredicted RBP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 KIRREL3Q8IZU9 778 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 SLC30A5Q8TAD4 765 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms