RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 MOCS3O95396 460 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 ADORA2AP29274 412 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 MKRN3Q13064 507 aaKnown RBP27.34■■□□□ 1.97
SHOX2-201ENST00000389589 KRT39Q6A163 491 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 SLFN12LQ6IEE8 588 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 TCP11Q8WWU5 503 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 TMEM8AQ9HCN3 771 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 CAPN6Q9Y6Q1 641 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 IVNS1ABPQ9Y6Y0 642 aa27.34■■□□□ 1.97
SHOX2-201ENST00000389589 BTNL10A8MVZ5 291 aa27.33■■□□□ 1.97
SHOX2-201ENST00000389589 IER5Q5VY09 327 aa27.33■■□□□ 1.97
SHOX2-201ENST00000389589 ZNF467Q7Z7K2 595 aaPredicted RBP27.33■■□□□ 1.97
SHOX2-201ENST00000389589 RABGGTAQ92696 567 aa27.33■■□□□ 1.97
SHOX2-201ENST00000389589 GPR88Q9GZN0 384 aa27.33■■□□□ 1.97
SHOX2-201ENST00000389589 SMARCAD1Q9H4L7 1026 aa27.33■■□□□ 1.97
SHOX2-201ENST00000389589 VTA1Q9NP79 307 aa27.33■■□□□ 1.97
SHOX2-201ENST00000389589 NAGPAQ9UK23 515 aa27.33■■□□□ 1.97
SHOX2-201ENST00000389589 EXTL3O43909 919 aa27.32■■□□□ 1.96
SHOX2-201ENST00000389589 KIAA0753Q2KHM9 967 aa27.32■■□□□ 1.96
SHOX2-201ENST00000389589 PARK7Q99497 189 aaKnown RBP27.32■■□□□ 1.96
SHOX2-201ENST00000389589 JPH2Q9BR39 696 aaPredicted RBP27.32■■□□□ 1.96
SHOX2-201ENST00000389589 ZNF233A6NK53 670 aa27.32■■□□□ 1.96
SHOX2-201ENST00000389589 LRRIQ3A6PVS8 624 aaPredicted RBP27.32■■□□□ 1.96
SHOX2-201ENST00000389589 GPR161Q8N6U8 529 aaKnown RBP27.32■■□□□ 1.96
SHOX2-201ENST00000389589 CCDC127Q96BQ5 260 aa27.32■■□□□ 1.96
SHOX2-201ENST00000389589 NENFQ9UMX5 172 aa27.32■■□□□ 1.96
SHOX2-201ENST00000389589 COQ4Q9Y3A0 265 aa27.32■■□□□ 1.96
SHOX2-201ENST00000389589 ALKBH5Q6P6C2 394 aaKnown RBP27.31■■□□□ 1.96
SHOX2-201ENST00000389589 UBE2TQ9NPD8 197 aaPredicted RBP27.31■■□□□ 1.96
SHOX2-201ENST00000389589 PUF60Q9UHX1 559 aaKnown RBP27.31■■□□□ 1.96
SHOX2-201ENST00000389589 CTAGE15A4D2H0 777 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 ADCY3O60266 1144 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 CTAGE8P0CG41 777 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 PLCB4Q15147 1175 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 TEX35Q5T0J7 233 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 CTAGE6Q86UF2 777 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 CTAGE4Q8IX94 777 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 FAM213AQ9BRX8 229 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 PDGFCQ9NRA1 345 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 HDAC6Q9UBN7 1215 aa27.31■■□□□ 1.96
SHOX2-201ENST00000389589 RRP9O43818 475 aaKnown RBP27.3■■□□□ 1.96
SHOX2-201ENST00000389589 MARK3P27448 753 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 EFNA5P52803 228 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 LAMC2Q13753 1193 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 CAPSQ13938 189 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 ARHGAP44Q17R89 818 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 COPS5Q92905 334 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 SALL4Q9UJQ4 1053 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 INTUQ9ULD6 942 aa27.3■■□□□ 1.96
SHOX2-201ENST00000389589 LDHAP00338 332 aaKnown RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 PNMA6AP0CW24 399 aaPredicted RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 PRLRP16471 622 aa27.29■■□□□ 1.96
SHOX2-201ENST00000389589 NAP1L1P55209 391 aaKnown RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 MAP2K1Q02750 393 aaPredicted RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 MXD4Q14582 209 aaPredicted RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 KIF22Q14807 665 aa27.29■■□□□ 1.96
SHOX2-201ENST00000389589 TRIM50Q86XT4 487 aa27.29■■□□□ 1.96
SHOX2-201ENST00000389589 PDCL3Q9H2J4 239 aa27.29■■□□□ 1.96
SHOX2-201ENST00000389589 AGO2Q9UKV8 859 aaKnown RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 IGKV6-21A0A0C4DH24 114 aa27.29■■□□□ 1.96
SHOX2-201ENST00000389589 RBM47A0AV96 593 aaKnown RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 CKAP4Q07065 602 aaKnown RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 PRPF31Q8WWY3 499 aaKnown RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 PSPC1Q8WXF1 523 aaKnown RBP27.29■■□□□ 1.96
SHOX2-201ENST00000389589 TRPM7Q96QT4 1865 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 HBP1O60381 514 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 KLRC1P26715 233 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 GPC3P51654 580 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 TAPT1Q6NXT6 567 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 ARHGEF19Q8IW93 802 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 FBXL13Q8NEE6 735 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 SLC30A5Q8TAD4 765 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 TSKSQ9UJT2 592 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 ZBTB42B2RXF5 422 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 FOXN3O00409 490 aaPredicted RBP27.28■■□□□ 1.96
SHOX2-201ENST00000389589 DDX3XO00571 662 aaKnown RBP eCLIP27.28■■□□□ 1.96
SHOX2-201ENST00000389589 H2AFXP16104 143 aaPredicted RBP27.28■■□□□ 1.96
SHOX2-201ENST00000389589 FAM110CQ1W6H9 321 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 ARGLU1Q9NWB6 273 aaPredicted RBP27.28■■□□□ 1.96
SHOX2-201ENST00000389589 SNX12Q9UMY4 172 aa27.28■■□□□ 1.96
SHOX2-201ENST00000389589 GH1P01241 217 aa27.27■■□□□ 1.96
SHOX2-201ENST00000389589 ARHGAP1Q07960 439 aa27.27■■□□□ 1.96
SHOX2-201ENST00000389589 PSMD6Q15008 389 aa27.27■■□□□ 1.96
SHOX2-201ENST00000389589 IFI16Q16666 785 aaKnown RBP27.27■■□□□ 1.96
SHOX2-201ENST00000389589 FBXO38Q6PIJ6 1188 aa27.27■■□□□ 1.96
SHOX2-201ENST00000389589 RPGRIP1Q96KN7 1286 aa27.27■■□□□ 1.96
SHOX2-201ENST00000389589 SYT11Q9BT88 431 aa27.27■■□□□ 1.96
SHOX2-201ENST00000389589 PACSIN1Q9BY11 444 aa27.27■■□□□ 1.96
SHOX2-201ENST00000389589 BUB1O43683 1085 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 MFAP3P55082 362 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 CLDN10P78369 228 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 MAMDC4Q6UXC1 1216 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 ZPBP2Q6X784 338 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 GPR142Q7Z601 462 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 POP1Q99575 1024 aaKnown RBP27.26■■□□□ 1.95
SHOX2-201ENST00000389589 ERAP1Q9NZ08 941 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 TRPC6Q9Y210 931 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 PCDHGC5Q9Y5F6 944 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 H2AFZP0C0S5 128 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 DLATP10515 647 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms