RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 CUL3Q13618 768 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 KRT31Q15323 416 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 SPATA16Q9BXB7 569 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 SYNDIG1Q9H7V2 258 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 PLEKHA5Q9HAU0 1116 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 GOLGA8RI6L899 631 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 RXRBP28702 533 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 ST8SIA6P61647 398 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 DDX28Q9NUL7 540 aaKnown RBP12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 HIST1H2AGP0C0S8 130 aaPredicted RBP12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 HIST1H2ADP20671 130 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 SERPINB4P48594 390 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 LLGL1Q15334 1064 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 RESP18Q5W5W9 173 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 PPM1NQ8N819 430 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 BTN2A2Q8WVV5 523 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 HIST1H2AHQ96KK5 128 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 HIST1H2AJQ99878 128 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 H2AFJQ9BTM1 129 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 BFARQ9NZS9 450 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 TJP2Q9UDY2 1190 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 LSM7Q9UK45 103 aaKnown RBP12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 WDR62O43379 1518 aa12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
SEMA6D-206ENST00000389428 CFAP73A6NFT4 308 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 IFNAR1P17181 557 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 SULT1E1P49888 294 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 PPP2R2AP63151 447 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 CYP27A1Q02318 531 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 PADI6Q6TGC4 694 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 PLD3Q8IV08 490 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 PPP2R3CQ969Q6 453 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 POLR3FQ9H1D9 316 aaPredicted RBP12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 AIPL1Q9NZN9 384 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 TRAF3IP3Q9Y228 551 aa12.65□□□□□ -0.39
SEMA6D-206ENST00000389428 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 ORC4O43929 436 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PDIA2Q13087 525 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 CENPPQ6IPU0 288 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 RMDN1Q96DB5 314 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 FAM213AQ9BRX8 229 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 KRCC1Q9NPI7 259 aaPredicted RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 SNX24Q9Y343 169 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 NUP153P49790 1475 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 RASSF10A6NK89 507 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 RAD17O75943 681 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 SRP72O76094 671 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 VCAM1P19320 739 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 S100A5P33763 92 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 CDK17Q00537 523 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 E4F1Q66K89 784 aaPredicted RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 RUBCNQ92622 972 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 HEMGNQ9BXL5 484 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 NFKBIL1Q9UBC1 381 aaPredicted RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 NRBP1Q9UHY1 535 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 FAM32AQ9Y421 112 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 CLASP1Q7Z460 1538 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 ASNSP08243 561 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 VAMP7P51809 220 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 DEPDC1Q5TB30 811 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 SYDE1Q6ZW31 735 aaPredicted RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 BHMT2Q9H2M3 363 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 GCC2Q8IWJ2 1684 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 ANO9A1A5B4 782 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 FOXP2O15409 715 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 SNAP25P60880 206 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 SPATA2LQ8IUW3 424 aaPredicted RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 USP6NLQ92738 828 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 THOC1Q96FV9 657 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PARVAQ9NVD7 372 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 ZBTB5O15062 677 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 ASMTLO95671 621 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 APOA4P06727 396 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PYGMP11217 842 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 PMS1P54277 932 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 MRPS15P82914 257 aaKnown RBP12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 KIAA2013Q8IYS2 634 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 GPD1LQ8N335 351 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 DYNLL2Q96FJ2 89 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 EEF2KMTQ96G04 330 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 DIABLOQ9NR28 239 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
SEMA6D-206ENST00000389428 KCNQ4P56696 695 aa12.63□□□□□ -0.39
SEMA6D-206ENST00000389428 SFR1Q86XK3 245 aa12.63□□□□□ -0.39
SEMA6D-206ENST00000389428 RHPN2Q8IUC4 686 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms