RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ITIH4Q14624 930 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 PREPLQ4J6C6 727 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 ZNF394Q53GI3 561 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 PPP1R18Q6NYC8 613 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 SMYD3Q9H7B4 428 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 UBN1Q9NPG3 1134 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 DLGAP2Q9P1A6 1054 aa14.02□□□□□ -0.17
TRAPPC9-201ENST00000389328 PI4K2BG5E9Z4 385 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 RTN2O75298 545 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 CPP00450 1065 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 NR1H3Q13133 447 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 YTHDF3Q7Z739 585 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 ANKMY2Q8IV38 441 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 TNS3Q68CZ2 1445 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 FAM47DPA6NHR8 397 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 EVX2Q03828 476 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 KCNMA1Q12791 1236 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 FBXO33Q7Z6M2 555 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 VGLL2Q8N8G2 317 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 PNMA5Q96PV4 448 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 ZWILCHQ9H900 591 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 BLOC1S4Q9NUP1 217 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.174e-7■■■■■ 45.2
TRAPPC9-201ENST00000389328 SHOX2O60902 331 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 AKAP3O75969 853 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 COILP38432 576 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 ITGA8P53708 1063 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 STAT4Q14765 748 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 CCDC14Q49A88 953 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 NXNQ6DKJ4 435 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 KCNK18Q7Z418 384 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 AGGF1Q8N302 714 aaeCLIP14.01□□□□□ -0.172e-7■■■■■ 55.9
TRAPPC9-201ENST00000389328 ATL2Q8NHH9 583 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 DNAJC9Q8WXX5 260 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 CFAP36Q96G28 342 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 HAO1Q9UJM8 370 aa14.01□□□□□ -0.17
TRAPPC9-201ENST00000389328 TRPA1O75762 1119 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 NTSR2O95665 410 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 EYA4O95677 639 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 C1orf146Q5VVC0 180 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 CATSPER3Q86XQ3 398 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ATG4AQ8WYN0 398 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 CEP170P1Q96L14 293 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 SLC16A3O15427 465 aaKnown RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 CAMTA2O94983 1202 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ITIH2P19823 946 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ELF3P78545 371 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 TATDN2Q93075 761 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ABTB1Q969K4 478 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 FGD4Q96M96 766 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 CSRNP1Q96S65 589 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 KLF6Q99612 283 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 TRAIPQ9BWF2 469 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ROPN1BQ9BZX4 212 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ROPN1Q9HAT0 212 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 IL17RBQ9NRM6 502 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 FOXN3O00409 490 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 TJP3O95049 919 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ARL1P40616 181 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 STAT2P52630 851 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 EPHB1P54762 984 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 SLC8A3P57103 927 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 PDE1BQ01064 536 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 SATB1Q01826 763 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 PPP2R5CQ13362 524 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 QPCTQ16769 361 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 PRCCQ92733 491 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-201ENST00000389328 JMJD4Q9H9V9 463 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ABCF3Q9NUQ8 709 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 AIPL1Q9NZN9 384 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14□□□□□ -0.172e-6■■■■■ 37.3
TRAPPC9-201ENST00000389328 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 CYTH3O43739 400 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 EPC2Q52LR7 807 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 ZNF662Q6ZS27 426 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 PIP4K2CQ8TBX8 421 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 BAP1Q92560 729 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 MIEF2Q96C03 454 aa14□□□□□ -0.17
TRAPPC9-201ENST00000389328 MED24O75448 989 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 POLR2BP30876 1174 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 ARSEP51690 589 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 PRELPP51888 382 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 P3H1Q32P28 736 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 MDH1BQ5I0G3 518 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 ARHGEF16Q5VV41 709 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 ARHGAP27Q6ZUM4 889 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 SLC13A5Q86YT5 568 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 SALL4Q9UJQ4 1053 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 IFT172Q9UG01 1749 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 FLT1P17948 1338 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 NOL3O60936 208 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 GH2P01242 217 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 GSTA1P08263 222 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 SH2D4BQ5SQS7 431 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 MAP3K21Q5TCX8 1036 aa13.99□□□□□ -0.17
TRAPPC9-201ENST00000389328 DARS2Q6PI48 645 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms