RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 TRIM49CP0CI26 452 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 KCNA1Q09470 495 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 KCTD2Q14681 263 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 POTEEQ6S8J3 1075 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 THNSL1Q8IYQ7 743 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 PPP1R36Q96LQ0 422 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 TMEM47Q9BQJ4 181 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 FSD1LQ9BXM9 530 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 COG4Q9H9E3 785 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 DDX56Q9NY93 547 aaKnown RBP13.26□□□□□ -0.29
FANCA-202ENST00000389301 DLGAP2Q9P1A6 1054 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 SLC9A2Q9UBY0 812 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
FANCA-202ENST00000389301 ASAP2O43150 1006 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 GNA15P30679 374 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 NAALADL2Q58DX5 795 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 NYAP1Q6ZVC0 841 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 EDEM3Q9BZQ6 932 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 H7C1W4 665 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 PLA2G4AP47712 749 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 MRPS35P82673 323 aaKnown RBP13.26□□□□□ -0.29
FANCA-202ENST00000389301 KCNB1Q14721 858 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 LRRC31Q6UY01 552 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 C4orf33Q8N1A6 199 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 AGPAT1Q99943 283 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 ADNPQ9H2P0 1102 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
FANCA-202ENST00000389301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.295e-7■■□□□ 12.3
FANCA-202ENST00000389301 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 PSMD14O00487 310 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 KRT7P08729 469 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 SRGNP10124 158 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 CARSP49589 748 aaKnown RBP13.25□□□□□ -0.29
FANCA-202ENST00000389301 RCAN1P53805 252 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 SIK1P57059 783 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 SLC18A3Q16572 532 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 HEATR6Q6AI08 1181 aaKnown RBP13.25□□□□□ -0.29
FANCA-202ENST00000389301 ATL2Q8NHH9 583 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 RNF139Q8WU17 664 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 TBC1D23Q9NUY8 699 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 MARK3P27448 753 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 PRAMEP78395 509 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 MAPRE2Q15555 327 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 ZNF699Q32M78 642 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 NBPF20Q3BBV1 942 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 NLRP4Q96MN2 994 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
FANCA-202ENST00000389301 RFX7Q2KHR2 1363 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 ZBTB5O15062 677 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 DEAF1O75398 565 aaPredicted RBP13.25□□□□□ -0.29
FANCA-202ENST00000389301 HLA-DPA1P20036 260 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 SERPINB10P48595 397 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 USP17L6PQ6QN14 398 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 SH3RF3Q8TEJ3 882 aaPredicted RBP13.25□□□□□ -0.29
FANCA-202ENST00000389301 SNX19Q92543 992 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 PIK3R2O00459 728 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 STAT3P40763 770 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 HSPA2P54652 639 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 CCDC85BQ15834 202 aaPredicted RBP13.25□□□□□ -0.29
FANCA-202ENST00000389301 SLC35G2Q8TBE7 412 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 PKD2L2Q9NZM6 624 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 WDR17Q8IZU2 1322 aa13.25□□□□□ -0.29
FANCA-202ENST00000389301 CDH16O75309 829 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 CYB5D1Q6P9G0 228 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 C1orf228Q6PIY5 440 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 OR9Q1Q8NGQ5 310 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 ACAP3Q96P50 834 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 THTPAQ9BU02 230 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 DHX36Q9H2U1 1008 aaKnown RBP13.24□□□□□ -0.29
FANCA-202ENST00000389301 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
FANCA-202ENST00000389301 FAM47DPA6NHR8 397 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 RFX1P22670 979 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 IMPG1Q17R60 797 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 P3H1Q32P28 736 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 Q3C1V9 767 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 EEPD1Q7L9B9 569 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 ATXN7L3BQ96GX2 97 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 KIAA1586Q9HCI6 787 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 MARCOQ9UEW3 520 aaPredicted RBP13.24□□□□□ -0.29
FANCA-202ENST00000389301 ATP8B3O60423 1300 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 TMEM120BA0PK00 339 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 OSBPP22059 807 aa13.24□□□□□ -0.29
FANCA-202ENST00000389301 SSTR3P32745 418 aaPredicted RBP13.24□□□□□ -0.29
FANCA-202ENST00000389301 FASTKD1Q53R41 847 aaKnown RBP13.24□□□□□ -0.29
FANCA-202ENST00000389301 ZC3H12BQ5HYM0 836 aaKnown RBP13.24□□□□□ -0.29
FANCA-202ENST00000389301 SYDE1Q6ZW31 735 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms