RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 TNK2Q07912 1038 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 PTGISQ16647 500 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 FSCN1Q16658 493 aaKnown RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 ZNF630Q2M218 657 aaPredicted RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 TCTN1Q2MV58 587 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 PLEKHG6Q3KR16 790 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 TMEM259Q4ZIN3 620 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 PARP10Q53GL7 1025 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 C3orf38Q5JPI3 329 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 FAM26DQ5JW98 314 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 KANK4Q5T7N3 995 aaPredicted RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 ELMSAN1Q6PJG2 1045 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 PARM1Q6UWI2 310 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 CCBE1Q6UXH8 406 aaPredicted RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 CYP26C1Q6V0L0 522 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 KDM7AQ6ZMT4 941 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 SPOCD1Q6ZMY3 1216 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 C15orf39Q6ZRI6 1047 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 HIPK1Q86Z02 1210 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 CACTIN-AS1Q8N1I8 211 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 SYNPOQ8N3V7 929 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 MRPL43Q8N983 215 aaKnown RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 FAM200AQ8TCP9 573 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 FEM1CQ96JP0 617 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 STAC3Q96MF2 364 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 BDH2Q9BUT1 245 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 TBC1D2Q9BYX2 928 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 ZDHHC5Q9C0B5 715 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 BRD9Q9H8M2 597 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 POLR1BQ9H9Y6 1135 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 PIDD1Q9HB75 910 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 USP29Q9HBJ7 922 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 WDR6Q9NNW5 1121 aaKnown RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 DBF4Q9UBU7 674 aaPredicted RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 KCND3Q9UK17 655 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 PILRBQ9UKJ0 227 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 MAP4K5Q9Y4K4 846 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 MRPL42Q9Y6G3 142 aaKnown RBP1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 PLCE1Q9P212 2302 aa1.41□□□□□ -2.18
RNU6-42P-201ENST00000384165 CHD3Q12873 2000 aaKnown RBP1.4□□□□□ -2.18
RNU6-42P-201ENST00000384165 KTN1Q86UP2 1357 aaKnown RBP1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CCDC195A0A1B0GUA6 201 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 FSCN2O14926 492 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ARHGEF9O43307 516 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 LINC00271P0C7V0 271 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 FAM157CP0CG43 387 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CKBP12277 381 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ITGB5P18084 799 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ERCC3P19447 782 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CCNE1P24864 410 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 MSX1P28360 303 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 HOXC13P31276 330 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 GSK3AP49840 483 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CACNB3P54284 484 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CLDN6P56747 220 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ASIC1P78348 528 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 PTPN11Q06124 597 aaPredicted RBP1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 APOBRQ0VD83 1088 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CLN3Q13286 438 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ACVR2BQ13705 512 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 SEPT6Q14141 434 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 IHHQ14623 411 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 SMC1AQ14683 1233 aaKnown RBP1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 PTPRNQ16849 979 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CCDC144BQ3MJ40 725 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 AMOTQ4VCS5 1084 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 HSP90AB2PQ58FF8 381 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 MANEAQ5SRI9 462 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 STXBP5Q5T5C0 1151 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 GORABQ5T7V8 394 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 FKBP1CQ5VVH2 108 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 LYSMD4Q5XG99 296 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 LMBRD2Q68DH5 695 aaPredicted RBP1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 C1orf228Q6PIY5 440 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 PARS2Q7L3T8 475 aaKnown RBP1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ARMCX6Q7L4S7 300 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 TMC6Q7Z403 805 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CAMKMTQ7Z624 323 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CATIPQ7Z7H3 387 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 FERMT3Q86UX7 667 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 TMEM200AQ86VY9 491 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 PPFIBP1Q86W92 1011 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ABRAQ8N0Z2 381 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 NGEFQ8N5V2 710 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 PLEKHO2Q8TD55 490 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 HDAC7Q8WUI4 952 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CELF1Q92879 486 aaKnown RBP1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 FGF14Q92915 247 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 HPS3Q969F9 1004 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 RNF31Q96EP0 1072 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 ABHD17AQ96GS6 310 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 COL21A1Q96P44 957 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 PHF20Q9BVI0 1012 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CCDC8Q9H0W5 538 aaPredicted RBP1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 KAT14Q9H8E8 782 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 EHMT1Q9H9B1 1298 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 AS3MTQ9HBK9 375 aa1.4□□□□□ -2.19
RNU6-42P-201ENST00000384165 CAPN10Q9HC96 672 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms