RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 TTLL1O95922 423 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 ATP5DP30049 168 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 EDRF1Q3B7T1 1238 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 FRMD5Q7Z6J6 570 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 ZC3H18Q86VM9 953 aaKnown RBP16.06■□□□□ 0.16
CTNS-202ENST00000381870 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 SLCO1B3Q9NPD5 702 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 ZBTB1Q9Y2K1 713 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 AKAP3O75969 853 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 SERPINB4P48594 390 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 STRN3Q13033 797 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 CCDC6Q16204 474 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 KYNUQ16719 465 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 MARCH10Q8NA82 808 aaPredicted RBP16.06■□□□□ 0.16
CTNS-202ENST00000381870 SEPT11Q9NVA2 429 aaKnown RBP16.06■□□□□ 0.16
CTNS-202ENST00000381870 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 USH1CQ9Y6N9 552 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 SYNGAP1Q96PV0 1343 aa16.06■□□□□ 0.16
CTNS-202ENST00000381870 MAPK13O15264 365 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 COILP38432 576 aaPredicted RBP16.05■□□□□ 0.16
CTNS-202ENST00000381870 STAT1P42224 750 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 CASP4P49662 377 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 WDR4P57081 412 aaKnown RBP16.05■□□□□ 0.16
CTNS-202ENST00000381870 DYNC1I2Q13409 638 aaKnown RBP16.05■□□□□ 0.16
CTNS-202ENST00000381870 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 SBK1Q52WX2 424 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 GPBP1Q86WP2 473 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 PIGSQ96S52 555 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 CHCHD3Q9NX63 227 aaKnown RBP16.05■□□□□ 0.16
CTNS-202ENST00000381870 CHORDC1Q9UHD1 332 aaPredicted RBP16.05■□□□□ 0.16
CTNS-202ENST00000381870 PHTF1Q9UMS5 762 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 GSTA2P09210 222 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 LMNB1P20700 586 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 GSTT1P30711 240 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 RCN1Q15293 331 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 CYFIP1Q7L576 1253 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 ZNF34Q8IZ26 560 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 SLC44A5Q8NCS7 719 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 KIAA1024Q9UPX6 916 aa16.05■□□□□ 0.16
CTNS-202ENST00000381870 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTNS-202ENST00000381870 PLA2G4BP0C869 781 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 TSPY3P0CV98 308 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 TSPY8P0CW00 308 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 CALCOCO2Q13137 446 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 ORC2Q13416 577 aaPredicted RBP16.04■□□□□ 0.16
CTNS-202ENST00000381870 MOGSQ13724 837 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 GIT2Q14161 759 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 DSTYKQ6XUX3 929 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 PWWP2AQ96N64 755 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 MIPEPQ99797 713 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 MKNK2Q9HBH9 465 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 STARD13Q9Y3M8 1113 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 MROH7Q68CQ1 1323 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 PASKQ96RG2 1323 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 KRT36O76013 467 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 TJP3O95049 919 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 PYGMP11217 842 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 SKIP12755 728 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 MARK3P27448 753 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 HOXD13P35453 343 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 TAF1BQ53T94 588 aaPredicted RBP16.04■□□□□ 0.16
CTNS-202ENST00000381870 SPTY2D1Q68D10 685 aaPredicted RBP16.04■□□□□ 0.16
CTNS-202ENST00000381870 C4orf50Q6ZRC1 276 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 PRUNE1Q86TP1 453 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 SH3TC2Q8TF17 1288 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 PIGBQ92521 554 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 DDX50Q9BQ39 737 aaKnown RBP16.04■□□□□ 0.16
CTNS-202ENST00000381870 SPZ1Q9BXG8 430 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 NAALADL1Q9UQQ1 740 aa16.04■□□□□ 0.16
CTNS-202ENST00000381870 LAMB1P07942 1786 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 KAT6BQ8WYB5 2073 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 FAM196BA6NMK8 535 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 ECE2O60344 883 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 HSPA6P17066 643 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 CHRNB2P17787 502 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 SOX5P35711 763 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 IL9RQ01113 521 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 CLUL1Q15846 466 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
CTNS-202ENST00000381870 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 MIGA2Q7L4E1 593 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 CPNE8Q86YQ8 564 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 HAS1Q92839 578 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 GATA6Q92908 595 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 SLC35C1Q96A29 364 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 ZSWIM1Q9BR11 485 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 TIPINQ9BVW5 301 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 COL4A1P02462 1669 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 SPAG7O75391 227 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 TTC4O95801 387 aa16.03■□□□□ 0.16
CTNS-202ENST00000381870 LMNAP02545 664 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms