RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 LUZP2Q86TE4 346 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 FAM227BQ96M60 508 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ANGPT2O15123 496 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 POU5F1BQ06416 359 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 TBL3Q12788 808 aaKnown RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ST13P5Q8NFI4 369 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 IPPQ9Y573 584 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 EFHC2Q5JST6 749 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 RHPN2Q8IUC4 686 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CCDC60Q8IWA6 550 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 GOLPH3LQ9H4A5 285 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 SLC38A7Q9NVC3 462 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 A0A0G2JND7 137 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 TGM3Q08188 693 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ERFEQ4G0M1 354 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 C10orf53Q8N6V4 93 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 DEAF1O75398 565 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 DOCK7Q96N67 2140 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 TBC1D10BQ4KMP7 808 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ARHGAP17Q68EM7 881 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 BBOX1O75936 387 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 TAP1Q03518 808 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 FAM162AQ96A26 154 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 IP6K2Q9UHH9 426 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 AHCTF1Q8WYP5 2266 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ATP5JP18859 108 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CSTF3Q12996 717 aaKnown RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 HAUS6Q7Z4H7 955 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 SPATA2LQ8IUW3 424 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 SDR42E1Q8WUS8 393 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 PGBD4Q96DM1 585 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 NMRK1Q9NWW6 199 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 PODXLO00592 558 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CNGA3Q16281 694 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 TMEM270Q6UE05 265 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CDR2LQ86X02 465 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 HORMAD1Q86X24 394 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CACNA2D2Q9NY47 1150 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ZDBF2Q9HCK1 2354 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ATP6V1C1P21283 382 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CHRNDQ07001 517 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 LRRC8EQ6NSJ5 796 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 OLFM3Q96PB7 478 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 PARVBQ9HBI1 364 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 CPA1P15085 419 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 MCPH1Q8NEM0 835 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 ARID1AO14497 2285 aa11.87□□□□□ -0.51
PTCHD1-201ENST00000379361 C16orf96A6NNT2 1141 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MYBL1P10243 752 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 RNF135Q8IUD6 432 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 OSCP1Q8WVF1 389 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MLH3Q9UHC1 1453 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 CPB1P15086 417 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 TRIM72Q6ZMU5 477 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 LSG1Q9H089 658 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MAP3K13O43283 966 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 ZNF658Q5TYW1 1059 aaPredicted RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 THAP9Q9H5L6 903 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 RGS9BPQ6ZS82 235 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 HPGDP15428 266 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 GPR1P46091 355 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 SLCO1A2P46721 670 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 IYDQ6PHW0 289 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 JAK2O60674 1132 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 RPSAP08865 295 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 RANBP1P43487 201 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MIGA2Q7L4E1 593 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 CLYBLQ8N0X4 340 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MYO1GB0I1T2 1018 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 BIRC5O15392 142 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MTRF1O75570 445 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 RASSF9O75901 435 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 POLE2P56282 527 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 TPI1P60174 286 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 RHOT2Q8IXI1 618 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 TTLL6Q8N841 843 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 TSC22D3Q99576 134 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 GALNT8Q9NY28 637 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 RNF26Q9BY78 433 aaPredicted RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 IARS2Q9NSE4 1012 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 ANAPC7Q9UJX3 599 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 PLA2G4BP0C869 781 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 UBE3AQ05086 875 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MTMR1Q13613 665 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 ARHGAP15Q53QZ3 475 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 ATPAF2Q8N5M1 289 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 EYA1Q99502 592 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 CLIC2O15247 247 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms