RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 GLI1P08151 1106 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 ICAM3P32942 547 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 TNNC1P63316 161 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 PPATQ06203 517 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 STXBP2Q15833 593 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 XKR3Q5GH77 459 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 TREML2Q5T2D2 321 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 KRT39Q6A163 491 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 EMBQ6PCB8 327 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 SND1Q7KZF4 910 aaKnown RBP eCLIP23.18■■□□□ 1.3
CNTFR-202ENST00000378980 IFT20Q8IY31 132 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 TMC2Q8TDI7 906 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 CCDC127Q96BQ5 260 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 ARHGEF26Q96DR7 871 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 HES6Q96HZ4 224 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 MFSD14AQ96MC6 490 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 TMEM8AQ9HCN3 771 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 COQ4Q9Y3A0 265 aa23.18■■□□□ 1.3
CNTFR-202ENST00000378980 HEXIM1O94992 359 aaKnown RBP23.17■■□□□ 1.3
CNTFR-202ENST00000378980 POMGNT1Q8WZA1 660 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 SEMA4DQ92854 862 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 THAP2Q9H0W7 228 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 POLR3FQ9H1D9 316 aaPredicted RBP23.17■■□□□ 1.3
CNTFR-202ENST00000378980 ARHGAP28Q9P2N2 729 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 PGRMC1O00264 195 aaKnown RBP23.17■■□□□ 1.3
CNTFR-202ENST00000378980 SYF2O95926 243 aaKnown RBP23.17■■□□□ 1.3
CNTFR-202ENST00000378980 CNTN2Q02246 1040 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 BRDTQ58F21 947 aaPredicted RBP23.17■■□□□ 1.3
CNTFR-202ENST00000378980 LBX2Q6XYB7 198 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 FAM71AQ8IYT1 594 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 SCFD2Q8WU76 684 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 EXOC4Q96A65 974 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 IFT74Q96LB3 600 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 KREMEN1Q96MU8 473 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 AMFRQ9UKV5 643 aa23.17■■□□□ 1.3
CNTFR-202ENST00000378980 HNRNPDLO14979 420 aaKnown RBP23.16■■□□□ 1.3
CNTFR-202ENST00000378980 CYP24A1Q07973 514 aa23.16■■□□□ 1.3
CNTFR-202ENST00000378980 MTERF2Q49AM1 385 aa23.16■■□□□ 1.3
CNTFR-202ENST00000378980 TAS1R3Q7RTX0 852 aa23.16■■□□□ 1.3
CNTFR-202ENST00000378980 ANKRD35Q8N283 1001 aa23.16■■□□□ 1.3
CNTFR-202ENST00000378980 RASGEF1CQ8N431 466 aa23.16■■□□□ 1.3
CNTFR-202ENST00000378980 CAVIN3Q969G5 261 aa23.16■■□□□ 1.3
CNTFR-202ENST00000378980 CALR3Q96L12 384 aaKnown RBP23.16■■□□□ 1.3
CNTFR-202ENST00000378980 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.16■■□□□ 1.3
CNTFR-202ENST00000378980 NOC2LQ9Y3T9 749 aaKnown RBP23.16■■□□□ 1.3
CNTFR-202ENST00000378980 SIP14410 1827 aa23.16■■□□□ 1.3
CNTFR-202ENST00000378980 ATG7O95352 703 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 GARTP22102 1010 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 GTF2H1P32780 548 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 GPC3P51654 580 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 CYFIP1Q7L576 1253 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 RPUSD2Q8IZ73 545 aaKnown RBP23.15■■□□□ 1.3
CNTFR-202ENST00000378980 PPM1KQ8N3J5 372 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
CNTFR-202ENST00000378980 POP1Q99575 1024 aaKnown RBP23.15■■□□□ 1.3
CNTFR-202ENST00000378980 ISCUQ9H1K1 167 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 MAFBQ9Y5Q3 323 aaPredicted RBP23.15■■□□□ 1.3
CNTFR-202ENST00000378980 SYNGAP1Q96PV0 1343 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 H0YCG3 227 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 ABCD1P33897 745 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 MFAP3P55082 362 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 GUCY2DQ02846 1103 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 ENPEPQ07075 957 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 FSTL1Q12841 308 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 EMC2Q15006 297 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 USP37Q86T82 979 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 GPD1LQ8N335 351 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 EPS8L1Q8TE68 723 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 SHC3Q92529 594 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 EPB41L5Q9HCM4 733 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 TOPORSQ9NS56 1045 aaPredicted RBP23.15■■□□□ 1.3
CNTFR-202ENST00000378980 PSD3Q9NYI0 1048 aa23.15■■□□□ 1.3
CNTFR-202ENST00000378980 NOCTQ9UK39 431 aaKnown RBP23.15■■□□□ 1.3
CNTFR-202ENST00000378980 ZNFX1Q9P2E3 1918 aaKnown RBP23.14■■□□□ 1.3
CNTFR-202ENST00000378980 ZSCAN5CA6NGD5 496 aaPredicted RBP23.14■■□□□ 1.29
CNTFR-202ENST00000378980 RAD51CO43502 376 aa23.14■■□□□ 1.29
CNTFR-202ENST00000378980 ATP4AP20648 1035 aa23.14■■□□□ 1.29
CNTFR-202ENST00000378980 USP8P40818 1118 aa23.14■■□□□ 1.29
CNTFR-202ENST00000378980 ALDH5A1P51649 535 aaPredicted RBP23.14■■□□□ 1.29
CNTFR-202ENST00000378980 HADHBP55084 474 aaKnown RBP23.14■■□□□ 1.29
CNTFR-202ENST00000378980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.14■■□□□ 1.293e-10■■■■■ 153.8
CNTFR-202ENST00000378980 ZNF302Q9NR11 478 aa23.14■■□□□ 1.29
CNTFR-202ENST00000378980 BTBD7Q9P203 1132 aa23.14■■□□□ 1.29
CNTFR-202ENST00000378980 FBXO40Q9UH90 709 aa23.14■■□□□ 1.29
CNTFR-202ENST00000378980 AGPSO00116 658 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 PHACTR2O75167 634 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 SGPL1O95470 568 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 NNTQ13423 1086 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 DLK2Q6UY11 383 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 RIOX2Q8IUF8 465 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 RHOT2Q8IXI1 618 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 KLHL7Q8IXQ5 586 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 FBXL13Q8NEE6 735 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 HELQQ8TDG4 1101 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 FBXO41Q8TF61 875 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 CNKSR2Q8WXI2 1034 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 BICD1Q96G01 975 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 COG5Q9UP83 839 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 PEX10O60683 326 aa23.13■■□□□ 1.29
CNTFR-202ENST00000378980 RNF40O75150 1001 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms