RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 TUBB2BQ9BVA1 445 aa16.71■□□□□ 0.27
RAB3IP-204ENST00000378815 CARD6Q9BX69 1037 aa16.71■□□□□ 0.27
RAB3IP-204ENST00000378815 KIAA1586Q9HCI6 787 aa16.71■□□□□ 0.27
RAB3IP-204ENST00000378815 MACROD2A1Z1Q3 448 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 SLC15A5A6NIM6 579 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 GTF2H1P32780 548 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 ADCYAP1R1P41586 468 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 ZNF157P51786 506 aaPredicted RBP16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 MXD4Q14582 209 aaPredicted RBP16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 USP37Q86T82 979 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 FAM213AQ9BRX8 229 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 ZCCHC17Q9NP64 241 aaKnown RBP16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 LUC7LQ9NQ29 371 aaKnown RBP16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 ERAP1Q9NZ08 941 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 CDC23Q9UJX2 597 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 TRPC6Q9Y210 931 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 COQ4Q9Y3A0 265 aa16.71■□□□□ 0.26
RAB3IP-204ENST00000378815 MANSC4A6NHS7 340 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 GFPT2O94808 682 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 PNMA6AP0CW24 399 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 EFNA5P52803 228 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 AMPD2Q01433 879 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 LAMTOR4Q0VGL1 99 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 KRT39Q6A163 491 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 PSPC1Q8WXF1 523 aaKnown RBP16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 ANKRD7Q92527 254 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 TINF2Q9BSI4 451 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 CCDC113Q9H0I3 377 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 SUGCTQ9HAC7 445 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 CPA4Q9UI42 421 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 ZNF233A6NK53 670 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 EVI5O60447 810 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 LGALS2P05162 132 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 EDN1P05305 212 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 LRRC71Q8N4P6 559 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 MNS1Q8NEH6 495 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 POP1Q99575 1024 aaKnown RBP16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 TARS2Q9BW92 718 aaKnown RBP16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 RNPEPQ9H4A4 650 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 AGO2Q9UKV8 859 aaKnown RBP16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 NENFQ9UMX5 172 aa16.7■□□□□ 0.26
RAB3IP-204ENST00000378815 LRRN2O75325 713 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 TADA3O75528 432 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 CLDN10P78369 228 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 MAP2K1Q02750 393 aaPredicted RBP16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 C10orf76Q5T2E6 689 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 SAPCD2Q86UD0 394 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 NPLOC4Q8TAT6 608 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 TRAPPC12Q8WVT3 735 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 ABHD16BQ9H3Z7 469 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 ZNF236Q9UL36 1845 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 A0A0B4J269 797 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 ARHGEF19Q8IW93 802 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 MSL3Q8N5Y2 521 aaKnown RBP16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 TRIM58Q8NG06 486 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 OLIG1Q8TAK6 271 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 TOPORSQ9NS56 1045 aaPredicted RBP16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 V9GYY5 206 aaPredicted RBP16.69■□□□□ 0.26
RAB3IP-204ENST00000378815 TRPM7Q96QT4 1865 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 ANO9A1A5B4 782 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 MSCO60682 206 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 GPC3P51654 580 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 NLRP11P59045 1033 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 PSMD6Q15008 389 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 MORN1Q5T089 497 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 CRELD2Q6UXH1 353 aaPredicted RBP16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 ZPBP2Q6X784 338 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 SEMA4DQ92854 862 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 ZBTB45Q96K62 511 aaPredicted RBP16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 SYT11Q9BT88 431 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 UBE2TQ9NPD8 197 aaPredicted RBP16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 SUCLA2Q9P2R7 463 aaPredicted RBP16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 SALL4Q9UJQ4 1053 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 CAPN6Q9Y6Q1 641 aa16.68■□□□□ 0.26
RAB3IP-204ENST00000378815 TACC1O75410 805 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 CCDC172P0C7W6 258 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 SRGAP2CP0DJJ0 459 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 SMPD1P17405 629 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 ACVR2BQ13705 512 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 NAB2Q15742 525 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 DUSP28Q4G0W2 176 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 ZNF484Q5JVG2 852 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 PAPD7Q5XG87 772 aaKnown RBP16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 TRAPPC11Q7Z392 1133 aa16.67■□□□□ 0.26
RAB3IP-204ENST00000378815 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms