RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 GLG1Q92896 1179 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 TMEM117Q9H0C3 514 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 TBC1D22BQ9NU19 505 aa19.6■□□□□ 0.73
TDP2-202ENST00000378198 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.6■□□□□ 0.73
TDP2-202ENST00000378198 ZNFX1Q9P2E3 1918 aaKnown RBP19.59■□□□□ 0.73
TDP2-202ENST00000378198 SGPL1O95470 568 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 USP8P40818 1118 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 PTGIRP43119 386 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 PMS2P54278 862 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 MAGOHP61326 146 aaKnown RBP19.59■□□□□ 0.73
TDP2-202ENST00000378198 OGFOD1Q8N543 542 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 EPS8L1Q8TE68 723 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 MAGOHBQ96A72 148 aaKnown RBP19.59■□□□□ 0.73
TDP2-202ENST00000378198 TLCD1Q96CP7 247 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 PABPC3Q9H361 631 aaKnown RBP19.59■□□□□ 0.73
TDP2-202ENST00000378198 CNOT10Q9H9A5 744 aaKnown RBP19.59■□□□□ 0.73
TDP2-202ENST00000378198 CNOT8Q9UFF9 292 aaKnown RBP19.59■□□□□ 0.73
TDP2-202ENST00000378198 PARP2Q9UGN5 583 aa19.59■□□□□ 0.73
TDP2-202ENST00000378198 NOCTQ9UK39 431 aaKnown RBP19.59■□□□□ 0.73
TDP2-202ENST00000378198 FSBPO95073 299 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 CHRNB2P17787 502 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 COMTP21964 271 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 YWHABP31946 246 aaKnown RBP19.58■□□□□ 0.73
TDP2-202ENST00000378198 PEX5P50542 639 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 MFAP3P55082 362 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 NCKAP1LP55160 1127 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 IL31RAQ8NI17 732 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 PLEKHO2Q8TD55 490 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 CLEC4DQ8WXI8 215 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 KRT35Q92764 455 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 CYFIP2Q96F07 1278 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 RUNDC3BQ96NL0 473 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 PCDHB18PQ96TA0 734 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 GMLQ99445 158 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 GLIS2Q9BZE0 524 aaPredicted RBP19.58■□□□□ 0.73
TDP2-202ENST00000378198 MAP3K20Q9NYL2 800 aaKnown RBP19.58■□□□□ 0.73
TDP2-202ENST00000378198 EXOC7Q9UPT5 735 aa19.58■□□□□ 0.73
TDP2-202ENST00000378198 FAM170AA1A519 330 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 TMEM110-MUSTN1A8MSY1 372 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 ASNSP08243 561 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 MESDQ14696 234 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 KCTD19Q17RG1 926 aaPredicted RBP19.58■□□□□ 0.72
TDP2-202ENST00000378198 ZDHHC24Q6UX98 284 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 MIGA2Q7L4E1 593 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 NOP9Q86U38 636 aaKnown RBP19.58■□□□□ 0.72
TDP2-202ENST00000378198 C4orf19Q8IY42 314 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 PRELID2Q8N945 189 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 PRPF38AQ8NAV1 312 aaKnown RBP19.58■□□□□ 0.72
TDP2-202ENST00000378198 VEZTQ9HBM0 779 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 BCS1LQ9Y276 419 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 SNX24Q9Y343 169 aa19.58■□□□□ 0.72
TDP2-202ENST00000378198 WDR81Q562E7 1941 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 NFIBO00712 420 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 TMOD1P28289 359 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 PLTPP55058 493 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 MTMR1Q13613 665 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 RASA3Q14644 834 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 ZNF746Q6NUN9 644 aaPredicted RBP19.57■□□□□ 0.72
TDP2-202ENST00000378198 AADACL2Q6P093 401 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 C6orf89Q6UWU4 347 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 ARMC9Q7Z3E5 817 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 FAM83AQ86UY5 434 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 SAMD3Q8N6K7 520 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 C18orf8Q96DM3 657 aa19.57■□□□□ 0.72
TDP2-202ENST00000378198 SLC16A4O15374 487 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 PEX3P56589 373 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 MRPS9P82933 396 aaKnown RBP19.56■□□□□ 0.72
TDP2-202ENST00000378198 BYSLQ13895 437 aaKnown RBP19.56■□□□□ 0.72
TDP2-202ENST00000378198 MMS22LQ6ZRQ5 1243 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 CROCCP2Q86T23 111 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 ZSWIM2Q8NEG5 633 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 SHC3Q92529 594 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 KAT5Q92993 513 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 CD101Q93033 1021 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 TMEM39BQ9GZU3 492 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 EPB41L4BQ9H329 900 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 GRHL1Q9NZI5 618 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 MTRF1LQ9UGC7 380 aaKnown RBP19.56■□□□□ 0.72
TDP2-202ENST00000378198 EP400Q96L91 3159 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 ASTN2O75129 1339 aaPredicted RBP19.56■□□□□ 0.72
TDP2-202ENST00000378198 MARCKSL1P49006 195 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 DRP2Q13474 957 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 CYP1B1Q16678 543 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 DENND2CQ68D51 928 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 KRT39Q6A163 491 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 CCDC137Q6PK04 289 aaKnown RBP19.56■□□□□ 0.72
TDP2-202ENST00000378198 PPM1KQ8N3J5 372 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 FBXO25Q8TCJ0 367 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 RAPGEF5Q92565 580 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 KAT2BQ92831 832 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 CENPTQ96BT3 561 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 HVCN1Q96D96 273 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 KREMEN1Q96MU8 473 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 CNOT7Q9UIV1 285 aaKnown RBP19.56■□□□□ 0.72
TDP2-202ENST00000378198 MTUS1Q9ULD2 1270 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 TRPC6Q9Y210 931 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 CAPN7Q9Y6W3 813 aa19.56■□□□□ 0.72
TDP2-202ENST00000378198 C5orf60A6NFR6 353 aa19.55■□□□□ 0.72
TDP2-202ENST00000378198 CCDC169A6NNP5 214 aa19.55■□□□□ 0.72
TDP2-202ENST00000378198 CYP26A1O43174 497 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms