RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 FSD2A1L4K1 749 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 RBAK-RBAKDNI3L0D1 243 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 CLDN3O15551 220 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 TSPAN1O60635 241 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 EXOC3O60645 756 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 CAND2O75155 1236 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 RPS6KA5O75582 802 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 PIGRP01833 764 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 ADSSP30520 456 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 MGAT3Q09327 533 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 NFX1Q12986 1120 aaKnown RBP14.16□□□□□ -0.14
CBWD3-203ENST00000377344 BFSP2Q13515 415 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 AMHR2Q16671 573 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 C1orf53Q5VUE5 145 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 SLFN12LQ6IEE8 588 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 FOXR2Q6PJQ5 311 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 THAP9Q9H5L6 903 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 HSPBP1Q9NZL4 362 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 FRMD4BQ9Y2L6 1034 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 NOC2LQ9Y3T9 749 aaKnown RBP14.16□□□□□ -0.14
CBWD3-203ENST00000377344 CNTNAP2Q9UHC6 1331 aa14.16□□□□□ -0.14
CBWD3-203ENST00000377344 TOM1L1O75674 476 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 GHRP10912 638 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 ATP1A3P13637 1013 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 ARF4P18085 180 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-203ENST00000377344 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 CCDC40Q4G0X9 1142 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 TSHZ1Q6ZSZ6 1077 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 FAM114A1Q8IWE2 563 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 RDH13Q8NBN7 331 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 SAAL1Q96ER3 474 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 CEP63Q96MT8 703 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 TOX2Q96NM4 488 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 HSD3B7Q9H2F3 369 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 GOLGA8IPA6NC78 632 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 GOLGA8JA6NMD2 632 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 KCNJ18B7U540 433 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 GARTP22102 1010 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 FAAP100Q0VG06 881 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 KCNJ12Q14500 433 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 PCBP1Q15365 356 aaKnown RBP eCLIP14.15□□□□□ -0.14
CBWD3-203ENST00000377344 NFIL3Q16649 462 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 ZNF568Q3ZCX4 644 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 FBXO47Q5MNV8 452 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 COL13A1Q5TAT6 717 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-203ENST00000377344 CDKAL1Q5VV42 579 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 LRRC8DQ7L1W4 858 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 XXYLT1Q8NBI6 393 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 CNOT6LQ96LI5 555 aaKnown RBP14.15□□□□□ -0.14
CBWD3-203ENST00000377344 MSTO1Q9BUK6 570 aa14.15□□□□□ -0.14
CBWD3-203ENST00000377344 AGO2Q9UKV8 859 aaKnown RBP14.15□□□□□ -0.14
CBWD3-203ENST00000377344 PIN4Q9Y237 131 aaKnown RBP14.15□□□□□ -0.14
CBWD3-203ENST00000377344 AKAP3O75969 853 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 SELPP16109 830 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 CASP4P49662 377 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 PAK2Q13177 524 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 UVSSAQ2YD98 709 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 FAM26DQ5JW98 314 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 EEF1DP3Q658K8 133 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 MPZL3Q6UWV2 235 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 FILIP1Q7Z7B0 1213 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 SLC9A9Q8IVB4 645 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 C12orf56Q8IXR9 622 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 ZSWIM2Q8NEG5 633 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 PPP1R12CQ9BZL4 782 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 HIPK3Q9H422 1215 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 DMAC2Q9NW81 257 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 TNFSF13BQ9Y275 285 aa14.14□□□□□ -0.15
CBWD3-203ENST00000377344 GPR182O15218 404 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 SERPINC1P01008 464 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 EPB41P11171 864 aaKnown RBP14.13□□□□□ -0.15
CBWD3-203ENST00000377344 ZNF18P17022 549 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 PSMC2P35998 433 aaKnown RBP14.13□□□□□ -0.15
CBWD3-203ENST00000377344 MTIF2P46199 727 aaKnown RBP14.13□□□□□ -0.15
CBWD3-203ENST00000377344 MRE11P49959 708 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 SPAG1Q07617 926 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 MYBPC2Q14324 1141 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 NOLC1Q14978 699 aaKnown RBP eCLIP14.13□□□□□ -0.15
CBWD3-203ENST00000377344 TCP11X2Q5H9J9 407 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 NOTUMQ6P988 496 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 IRF2BP1Q8IU81 584 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 ZC3H3Q8IXZ2 948 aaKnown RBP14.13□□□□□ -0.15
CBWD3-203ENST00000377344 FAM186BQ8IYM0 893 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 ADPGKQ9BRR6 497 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 FAM213AQ9BRX8 229 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 OSBPL7Q9BZF2 842 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 HAPLN2Q9GZV7 340 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 PDZD7Q9H5P4 517 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 AGPAT5Q9NUQ2 364 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 TMEM39AQ9NV64 488 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 STYXL1Q9Y6J8 313 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 A0A0B4J269 797 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
CBWD3-203ENST00000377344 N4BP3O15049 544 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms