RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TOPAZ1Q8N9V7 1692 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 ACTN4O43707 911 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 MSCO60682 206 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 SLITRK3O94933 977 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 IGFBP4P22692 258 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 SLC26A2P50443 739 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 RBP5P82980 135 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 LAMTOR4Q0VGL1 99 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 DRAP1Q14919 205 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 VEPH1Q14D04 833 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 PTPAQ15257 358 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 MGAT5BQ3V5L5 792 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 RWDD4Q6NW29 188 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 MOXD1Q6UVY6 613 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 SAMD3Q8N6K7 520 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 CCDC89Q8N998 374 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 CEP63Q96MT8 703 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 PAIP2Q9BPZ3 127 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 SIK2Q9H0K1 926 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 SLC12A6Q9UHW9 1150 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 TBX20Q9UMR3 447 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 HMGCRP04035 888 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 STAG3L1P0CL83 205 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 GRIK1P39086 918 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 CASP4P49662 377 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 KRT17Q04695 432 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 CCL14Q16627 93 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 C1orf228Q6PIY5 440 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 IQCDQ96DY2 449 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 CCDC51Q96ER9 411 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 MRFAP1L1Q96HT8 127 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 TSNARE1Q96NA8 513 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 C7orf25Q9BPX7 421 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 CBWD1Q9BRT8 395 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 PPANQ9NQ55 473 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 ATP8B3O60423 1300 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 ENC1O14682 589 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 KPNA6O60684 536 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 GJB1P08034 283 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 RGS7P49802 495 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ZBED6P86452 979 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 CELF3Q5SZQ8 465 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 CBWD2Q8IUF1 395 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 C4orf19Q8IY42 314 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 SYCE1Q8N0S2 351 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 TMEM35BQ8NCS4 154 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 CASTOR2A6NHX0 329 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 H7C0C1 242 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 FOXP2O15409 715 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ATP5OP48047 213 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 PPP2R5CQ13362 524 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 BTG3Q14201 252 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 Q4G0T1 1027 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 APPL2Q8NEU8 664 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 PPP1R14CQ8TAE6 165 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 GANCQ8TET4 914 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 NAP1L3Q99457 506 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 TIPINQ9BVW5 301 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 TRPC7Q9HCX4 862 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 CGNQ9P2M7 1197 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 HDAC6Q9UBN7 1215 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 BZW2Q9Y6E2 419 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 KNL1Q8NG31 2342 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 A0A0G2JLL6 359 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 PPP1R11O60927 126 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ITGB3P05106 788 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 PRRT2Q7Z6L0 340 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 SAPCD2Q86UD0 394 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ACRBPQ8NEB7 543 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 L3MBTL3Q96JM7 780 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF512Q96ME7 567 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF148Q9UQR1 794 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 TIMM13Q9Y5L4 95 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 LRRD1A4D1F6 860 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 TBKBP1A7MCY6 615 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 EVI5O60447 810 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 XPAP23025 273 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 MCM3P25205 808 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 GNA15P30679 374 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 DPYDQ12882 1025 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 EPC2Q52LR7 807 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 TAF2Q6P1X5 1199 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 BTNL9Q6UXG8 535 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 CCDC63Q8NA47 563 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 RSAD2Q8WXG1 361 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 ADAM2Q99965 735 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 IQCGQ9H095 443 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 INTS2Q9H0H0 1204 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 KCND2Q9NZV8 630 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 PCSK1NQ9UHG2 260 aa9.08□□□□□ -0.96
CRNKL1-202ENST00000377340 CYP26A1O43174 497 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 INHAP05111 366 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 LCP1P13796 627 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ORC1Q13415 861 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms