RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ADKP55263 362 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 TMCO3Q6UWJ1 677 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 TOGARAM2Q6ZUX3 1019 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 SLFN12Q8IYM2 578 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 PIGOQ8TEQ8 1089 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 SEPT8Q92599 483 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 FAM167AQ96KS9 214 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 SLC9A7Q96T83 725 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 NAP1L4Q99733 375 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 CYP26B1Q9NR63 512 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 ZNF446Q9NWS9 450 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 CCDC66A2RUB6 948 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 ENPP3O14638 875 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 FANCGO15287 622 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 GJB5O95377 273 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 PARNO95453 639 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 NLRP11P59045 1033 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 TAP1Q03518 808 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 IER5Q5VY09 327 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 TSHZ1Q6ZSZ6 1077 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 RSRC2Q7L4I2 434 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 RSPH3Q86UC2 560 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 FAM228AQ86W67 206 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 TMTC1Q8IUR5 882 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 TMEM143Q96AN5 459 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 CARD6Q9BX69 1037 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 MTIF3Q9H2K0 278 aaKnown RBP13.59□□□□□ -0.23
VRK3-202ENST00000377011 MAGEF1Q9HAY2 307 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 XPNPEP1Q9NQW7 623 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 AKT3Q9Y243 479 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
VRK3-202ENST00000377011 KDM3AQ9Y4C1 1321 aa13.58□□□□□ -0.23
VRK3-202ENST00000377011 IBSPP21815 317 aaPredicted RBP13.58□□□□□ -0.24
VRK3-202ENST00000377011 YWHABP31946 246 aaKnown RBP13.58□□□□□ -0.24
VRK3-202ENST00000377011 GATMP50440 423 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 GPC3P51654 580 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 PPP2R3AQ06190 1150 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 GOLGA8FQ08AF8 430 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 GOLGA8DPQ0D2H9 430 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 TBC1D8BQ0IIM8 1120 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 PAK1Q13153 545 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 C4orf19Q8IY42 314 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 PHOSPHO2Q8TCD6 241 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 CEP170P1Q96L14 293 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 POLD4Q9HCU8 107 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 ERVK-5Q9HDB9 667 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 ADGRG1Q9Y653 693 aa13.58□□□□□ -0.24
VRK3-202ENST00000377011 PRRC2BQ5JSZ5 2229 aaKnown RBP13.57□□□□□ -0.24
VRK3-202ENST00000377011 TLL1O43897 1013 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 KIF5CO60282 957 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 MAFO75444 373 aaPredicted RBP13.57□□□□□ -0.24
VRK3-202ENST00000377011 PRPHP41219 470 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
VRK3-202ENST00000377011 KCNB1Q14721 858 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 POTEGQ6S5H5 508 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 CRIPAKQ8N1N5 446 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 NME8Q8N427 588 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 LRRN4CLQ8ND94 238 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 GOLGA1Q92805 767 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 TOP1MTQ969P6 601 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 WDR24Q96S15 920 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 CUEDC2Q9H467 287 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 MSRAQ9UJ68 235 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 ST3GAL5Q9UNP4 418 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 FHOD1Q9Y613 1164 aa13.57□□□□□ -0.24
VRK3-202ENST00000377011 A0A087WZ62 844 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 MAGEB2O15479 319 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 TEX33O43247 280 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 PNMA6AP0CW24 399 aaPredicted RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 PPP1R2P41236 205 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 RAB30Q15771 203 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 HSP90AA4PQ58FG1 418 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 XKR9Q5GH70 373 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 PPP2R2DQ66LE6 453 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 KLHL10Q6JEL2 608 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 CEP112Q8N8E3 955 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 USP38Q8NB14 1042 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 NOC3LQ8WTT2 800 aaKnown RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 DHX33Q9H6R0 707 aaKnown RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 ZSWIM4Q9H7M6 989 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 SLC28A3Q9HAS3 691 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 HCSTQ9UBK5 93 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 MTUS1Q9ULD2 1270 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 CTNND2Q9UQB3 1225 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 COL4A4P53420 1690 aaPredicted RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 RPN1P04843 607 aaKnown RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 LINC00271P0C7V0 271 aa13.56□□□□□ -0.24
VRK3-202ENST00000377011 COPB1P53618 953 aaKnown RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 CRYBB1P53674 252 aaPredicted RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
VRK3-202ENST00000377011 PAK2Q13177 524 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms