RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 PCDHA11Q9Y5I1 949 aa6.96□□□□□ -1.3
SSX3-202ENST00000376893 LRRFIP2Q9Y608 721 aaKnown RBP6.96□□□□□ -1.3
SSX3-202ENST00000376893 SLX4Q8IY92 1834 aa6.96□□□□□ -1.3
SSX3-202ENST00000376893 COL4A5P29400 1685 aa6.96□□□□□ -1.3
SSX3-202ENST00000376893 SPEF2Q9C093 1822 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 PI4KAP2A4QPH2 592 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 SHISA8B8ZZ34 492 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 M0R082 166 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 MYO1BO43795 1136 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 DEAF1O75398 565 aaPredicted RBP6.95□□□□□ -1.3
SSX3-202ENST00000376893 IGKV5-2P06315 115 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 LCP1P13796 627 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 PDCP20941 246 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 YY1P25490 414 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 KIR3DL1P43629 444 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 PRELPP51888 382 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 PPFIA1Q13136 1202 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 GAS6Q14393 721 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 GPR19Q15760 415 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 ANO6Q4KMQ2 910 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 GRAMD1CQ8IYS0 662 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 ZNF655Q8N720 491 aaPredicted RBP6.95□□□□□ -1.3
SSX3-202ENST00000376893 PI4KAP1Q8N8J0 262 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 C1orf131Q8NDD1 294 aaKnown RBP6.95□□□□□ -1.3
SSX3-202ENST00000376893 ZNF417Q8TAU3 575 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 TRIM63Q969Q1 353 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 ZNF622Q969S3 477 aaKnown RBP eCLIP6.95□□□□□ -1.32e-6■■□□□ 13.4
SSX3-202ENST00000376893 RIPOR3Q96MK2 946 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 ZNF587Q96SQ5 575 aaPredicted RBP6.95□□□□□ -1.3
SSX3-202ENST00000376893 UTP14AQ9BVJ6 771 aaKnown RBP6.95□□□□□ -1.3
SSX3-202ENST00000376893 MYLK2Q9H1R3 596 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 BHMT2Q9H2M3 363 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 CDIP1Q9H305 208 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 PCIF1Q9H4Z3 704 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 SMURF1Q9HCE7 757 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 TOMM22Q9NS69 142 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 PIM2Q9P1W9 311 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 PDP2Q9P2J9 529 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 TRMT112Q9UI30 125 aaKnown RBP6.95□□□□□ -1.3
SSX3-202ENST00000376893 POLHQ9Y253 713 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 ACTL7BQ9Y614 415 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 LTBP1Q14766 1721 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 ABCC4O15439 1325 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 SH3TC1Q8TE82 1336 aa6.95□□□□□ -1.3
SSX3-202ENST00000376893 H0YIN7 160 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 DLL1O00548 723 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 DVL2O14641 736 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 NDUFS2O75306 463 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 UBXN7O94888 489 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PDE6AP16499 860 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PAMP19021 973 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 SLC9A1P19634 815 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PEX2P28328 305 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 SLC5A3P53794 718 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 MRPS9P82933 396 aaKnown RBP6.94□□□□□ -1.3
SSX3-202ENST00000376893 LSAMPQ13449 338 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 TRIM14Q14142 442 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PLA2G4EQ3MJ16 856 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 CRY2Q49AN0 593 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PARP10Q53GL7 1025 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 HSP90AB3PQ58FF7 597 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 INTS11Q5TA45 600 aaKnown RBP6.94□□□□□ -1.3
SSX3-202ENST00000376893 RNF220Q5VTB9 566 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 KCNK18Q7Z418 384 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 CAMKK1Q8N5S9 505 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 DTWD2Q8NBA8 298 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 C2CD4AQ8NCU7 369 aaPredicted RBP6.94□□□□□ -1.3
SSX3-202ENST00000376893 FAM89AQ96GI7 184 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 TBCBQ99426 244 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 HDAC8Q9BY41 377 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 NYXQ9GZU5 481 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 ACSS3Q9H6R3 686 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 DMRT3Q9NQL9 472 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PRDM10Q9NQV6 1147 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 FAM105AQ9NUU6 356 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 RTEL1Q9NZ71 1219 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 CLEC1BQ9P126 229 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 KCNG1Q9UIX4 513 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 GPR52Q9Y2T5 361 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 PCDHGB3Q9Y5G1 929 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 ZBED9Q6R2W3 1325 aa6.94□□□□□ -1.3
SSX3-202ENST00000376893 CAPN8A6NHC0 703 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 FRS3O43559 492 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 MGEA5O60502 916 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 HIP1RO75146 1068 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 CNOT4O95628 575 aaKnown RBP6.93□□□□□ -1.3
SSX3-202ENST00000376893 DDX58O95786 925 aaKnown RBP6.93□□□□□ -1.3
SSX3-202ENST00000376893 IFNGR1P15260 489 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 ENDOUP21128 410 aaKnown RBP6.93□□□□□ -1.3
SSX3-202ENST00000376893 COPB2P35606 906 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 CHKAP35790 457 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 RXRGP48443 463 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 USP11P51784 963 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 POLD3Q15054 466 aaPredicted RBP6.93□□□□□ -1.3
SSX3-202ENST00000376893 LLGL1Q15334 1064 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 EPHA7Q15375 998 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 PGS1Q32NB8 556 aa6.93□□□□□ -1.3
SSX3-202ENST00000376893 HABP4Q5JVS0 413 aaKnown RBP6.93□□□□□ -1.3
SSX3-202ENST00000376893 ANKRD34AQ69YU3 496 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms