RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ZNF772Q68DY9 489 aaPredicted RBP27.26■■□□□ 1.95
C9orf40-201ENST00000376854 ZDHHC24Q6UX98 284 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 HOOK3Q86VS8 718 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 PRELID2Q8N945 189 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 PLEKHO2Q8TD55 490 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 RAPGEF5Q92565 580 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 AGBL1Q96MI9 1066 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 PCDHB18PQ96TA0 734 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 EPB41L4BQ9H329 900 aa27.26■■□□□ 1.95
C9orf40-201ENST00000376854 SCAF8Q9UPN6 1271 aaKnown RBP27.26■■□□□ 1.95
C9orf40-201ENST00000376854 COMTP21964 271 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 PTGIRP43119 386 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 MESDQ14696 234 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 CNPY4Q8N129 248 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 LARGE2Q8N3Y3 721 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 FBXO25Q8TCJ0 367 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 RPS6KC1Q96S38 1066 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 PABPC3Q9H361 631 aaKnown RBP27.25■■□□□ 1.95
C9orf40-201ENST00000376854 DDX20Q9UHI6 824 aaKnown RBP27.25■■□□□ 1.95
C9orf40-201ENST00000376854 DBR1Q9UK59 544 aaKnown RBP27.25■■□□□ 1.95
C9orf40-201ENST00000376854 TNS1Q9HBL0 1735 aaKnown RBP27.25■■□□□ 1.95
C9orf40-201ENST00000376854 H0YHG0 523 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 DHX15O43143 795 aaKnown RBP27.25■■□□□ 1.95
C9orf40-201ENST00000376854 SHBGP04278 402 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 C6orf89Q6UWU4 347 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.25■■□□□ 1.952e-7■■■■■ 93.2
C9orf40-201ENST00000376854 COL20A1Q9P218 1284 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 CCPG1Q9ULG6 757 aa27.25■■□□□ 1.95
C9orf40-201ENST00000376854 CAND2O75155 1236 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 NUDT17P0C025 328 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 MXI1P50539 228 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 HAUS6Q7Z4H7 955 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 PRPF38AQ8NAV1 312 aaKnown RBP27.24■■□□□ 1.95
C9orf40-201ENST00000376854 IL31RAQ8NI17 732 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 EPS8L1Q8TE68 723 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 TMEM117Q9H0C3 514 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 DEFB129Q9H1M3 183 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 CHRNB2P17787 502 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 CTNNA2P26232 953 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 QPCTQ16769 361 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 SEL1L2Q5TEA6 688 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 DENND2CQ68D51 928 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 NOP9Q86U38 636 aaKnown RBP27.24■■□□□ 1.95
C9orf40-201ENST00000376854 SUGP1Q8IWZ8 645 aaKnown RBP27.24■■□□□ 1.95
C9orf40-201ENST00000376854 SH2D3AQ9BRG2 576 aa27.24■■□□□ 1.95
C9orf40-201ENST00000376854 CNOT10Q9H9A5 744 aaKnown RBP27.24■■□□□ 1.95
C9orf40-201ENST00000376854 NOCTQ9UK39 431 aaKnown RBP27.24■■□□□ 1.95
C9orf40-201ENST00000376854 ATMINO43313 823 aaPredicted RBP27.23■■□□□ 1.95
C9orf40-201ENST00000376854 PEX5P50542 639 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 FAM71AQ8IYT1 594 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 OGFOD1Q8N543 542 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 GRHL1Q9NZI5 618 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 PCYOX1Q9UHG3 505 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 RPTORQ8N122 1335 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 PSME4Q14997 1843 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 TULP1O00294 542 aaPredicted RBP27.23■■□□□ 1.95
C9orf40-201ENST00000376854 HNRNPH1P31943 449 aaKnown RBP27.23■■□□□ 1.95
C9orf40-201ENST00000376854 QARSP47897 775 aaKnown RBP27.23■■□□□ 1.95
C9orf40-201ENST00000376854 CDR1P51861 262 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 GTF2BQ00403 316 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 EN1Q05925 392 aaPredicted RBP27.23■■□□□ 1.95
C9orf40-201ENST00000376854 WNT8AQ9H1J5 351 aa27.23■■□□□ 1.95
C9orf40-201ENST00000376854 MAPK13O15264 365 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 ICAM1P05362 532 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 CAP2P40123 477 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 TTC27Q6P3X3 843 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 ZDHHC14Q8IZN3 488 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 PPM1KQ8N3J5 372 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 RNF25Q96BH1 459 aaPredicted RBP27.22■■□□□ 1.95
C9orf40-201ENST00000376854 AGO4Q9HCK5 861 aaKnown RBP27.22■■□□□ 1.95
C9orf40-201ENST00000376854 PNMA2Q9UL42 364 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 PODXLO00592 558 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 NFIBO00712 420 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 BACH1O14867 736 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 MTA2O94776 668 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 GGPS1O95749 300 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 GZMAP12544 262 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 RPL21P46778 160 aaKnown RBP27.22■■□□□ 1.95
C9orf40-201ENST00000376854 TKFCQ3LXA3 575 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 MORC4Q8TE76 937 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 ACP6Q9NPH0 428 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 TRPC6Q9Y210 931 aa27.22■■□□□ 1.95
C9orf40-201ENST00000376854 GOLGA8IPA6NC78 632 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 GOLGA8JA6NMD2 632 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 SLC16A4O15374 487 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 CYP26A1O43174 497 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 PYGMP11217 842 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 PTGER2P43116 358 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 BYSLQ13895 437 aaKnown RBP27.21■■□□□ 1.95
C9orf40-201ENST00000376854 RASA3Q14644 834 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 KCNV1Q6PIU1 500 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 CCDC137Q6PK04 289 aaKnown RBP27.21■■□□□ 1.95
C9orf40-201ENST00000376854 NIPA1Q7RTP0 329 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 SLC47A2Q86VL8 602 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 MDM1Q8TC05 714 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 KREMEN1Q96MU8 473 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 LOXHD1Q8IVV2 1947 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 YWHABP31946 246 aaKnown RBP27.21■■□□□ 1.95
C9orf40-201ENST00000376854 GBP1P32455 592 aa27.21■■□□□ 1.95
C9orf40-201ENST00000376854 MAP2K1Q02750 393 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms