RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 TMC5Q6UXY8 1006 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 NECAB1Q8N987 351 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 ACSF2Q96CM8 615 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-202ENST00000376610 KLHL5Q96PQ7 755 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 IRF2BPLQ9H1B7 796 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 TTC12Q9H892 705 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-202ENST00000376610 IPPQ9Y573 584 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 B4GALT3O60512 393 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 TSPAN1O60635 241 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 SOD2P04179 222 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 FDPSP14324 419 aaKnown RBP20.55■□□□□ 0.88
HDAC6-202ENST00000376610 AVPR2P30518 371 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 OR1G1P47890 313 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 POU5F1BQ06416 359 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 ZDHHC14Q8IZN3 488 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 SMG8Q8ND04 991 aaKnown RBP20.55■□□□□ 0.88
HDAC6-202ENST00000376610 TNFRSF25Q93038 417 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 HSD17B14Q9BPX1 270 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 VN1R3Q9BXE9 311 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 XPNPEP1Q9NQW7 623 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 DPP7Q9UHL4 492 aa20.55■□□□□ 0.88
HDAC6-202ENST00000376610 PRG3Q9Y2Y8 225 aaPredicted RBP20.55■□□□□ 0.88
HDAC6-202ENST00000376610 ARL5CA6NH57 179 aa20.54■□□□□ 0.88
HDAC6-202ENST00000376610 TXKP42681 527 aa20.54■□□□□ 0.88
HDAC6-202ENST00000376610 AFF1P51825 1210 aaKnown RBP20.54■□□□□ 0.88
HDAC6-202ENST00000376610 ME3Q16798 604 aa20.54■□□□□ 0.88
HDAC6-202ENST00000376610 CCDC149Q6ZUS6 474 aa20.54■□□□□ 0.88
HDAC6-202ENST00000376610 DIS3L2Q8IYB7 885 aaKnown RBP20.54■□□□□ 0.88
HDAC6-202ENST00000376610 CPB2Q96IY4 423 aa20.54■□□□□ 0.88
HDAC6-202ENST00000376610 EIF2AQ9BY44 585 aaKnown RBP20.54■□□□□ 0.88
HDAC6-202ENST00000376610 CSRNP2Q9H175 543 aa20.54■□□□□ 0.88
HDAC6-202ENST00000376610 TDRD15B5MCY1 1934 aaKnown RBP20.54■□□□□ 0.88
HDAC6-202ENST00000376610 BTBD18B2RXH4 712 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 C2CD2LO14523 706 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 BRD1O95696 1058 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 ADH1AP07327 375 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 CNPP09543 421 aaKnown RBP20.53■□□□□ 0.88
HDAC6-202ENST00000376610 MLH1P40692 756 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 CLCN4P51793 760 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 NUBP1P53384 320 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 VCPP55072 806 aaKnown RBP20.53■□□□□ 0.88
HDAC6-202ENST00000376610 MBTD1Q05BQ5 628 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 CAPSQ13938 189 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 KANK3Q6NY19 840 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 OTOP3Q7RTS5 596 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 GPR149Q86SP6 731 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 IFNLR1Q8IU57 520 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-202ENST00000376610 NSUN7Q8NE18 718 aaKnown RBP20.53■□□□□ 0.88
HDAC6-202ENST00000376610 GAD1Q99259 594 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 HERC2P3Q9BVR0 1158 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 APOL6Q9BWW8 343 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 LIMD1Q9UGP4 676 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 GIT1Q9Y2X7 761 aa20.53■□□□□ 0.88
HDAC6-202ENST00000376610 INPPL1O15357 1258 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 ASGR2P07307 311 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 GLUD2P49448 558 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 FOSBP53539 338 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 TCF15Q12870 199 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 SAFBQ15424 915 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC6-202ENST00000376610 COLGALT2Q8IYK4 626 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 ASAP3Q8TDY4 903 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 COLEC11Q9BWP8 271 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 NFKBIZQ9BYH8 718 aa20.52■□□□□ 0.88
HDAC6-202ENST00000376610 XRCC6P12956 609 aaKnown RBP eCLIP20.51■□□□□ 0.87
HDAC6-202ENST00000376610 ARL2P36404 184 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 RARRES1P49788 294 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 SCNN1GP51170 649 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 NEK4P51957 841 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 SLC27A1Q6PCB7 646 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 C15orf39Q6ZRI6 1047 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 PIGOQ8TEQ8 1089 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 RPS6KC1Q96S38 1066 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 POLR3FQ9H1D9 316 aaPredicted RBP20.51■□□□□ 0.87
HDAC6-202ENST00000376610 RNF39Q9H2S5 420 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 MFSD1Q9H3U5 465 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 MAN1C1Q9NR34 630 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 HES2Q9Y543 173 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 DENND4AQ7Z401 1863 aa20.51■□□□□ 0.87
HDAC6-202ENST00000376610 USO1O60763 962 aaKnown RBP20.5■□□□□ 0.87
HDAC6-202ENST00000376610 LILRB3O75022 631 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 LARGE1O95461 756 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 GLUD1P00367 558 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 PDGFBP01127 241 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-202ENST00000376610 ARF4P18085 180 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-202ENST00000376610 GLRA2P23416 452 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 DSC1Q08554 894 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 MCPH1Q8NEM0 835 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 ATOH1Q92858 354 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-202ENST00000376610 ZFP42Q96MM3 310 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 MARCH5Q9NX47 278 aa20.5■□□□□ 0.87
HDAC6-202ENST00000376610 POTEMA6NI47 508 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 LRRIQ4A6NIV6 560 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 JAK2O60674 1132 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 AMHR2Q16671 573 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 ZBTB8OSQ8IWT0 167 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 ERMNQ8TAM6 284 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 STAMQ92783 540 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 MTMR9Q96QG7 549 aa20.49■□□□□ 0.87
HDAC6-202ENST00000376610 NXF3Q9H4D5 531 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms