RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ORC2Q13416 577 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ZCWPW2Q504Y3 356 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PHLDB3Q6NSJ2 640 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 APOBEC3HQ6NTF7 200 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TMEM117Q9H0C3 514 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SAYSD1Q9NPB0 183 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CNTNAP4Q9C0A0 1308 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 EP400Q96L91 3159 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CA4P22748 312 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SCTRP47872 440 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MXRA7P84157 204 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MAPK7Q13164 816 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SEMA3FQ13275 785 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DGKZQ13574 1117 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 NEDD9Q14511 834 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 C6orf118Q5T5N4 469 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TMEM270Q6UE05 265 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ZBTB33Q86T24 672 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 USP37Q86T82 979 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ACTRT1Q8TDG2 376 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PARP2Q9UGN5 583 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DCCP43146 1447 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 EXOC1LA0A1B0GW35 172 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SGK1O00141 431 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PIK3CAP42336 1068 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PRAMEF18Q5VWM3 479 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SYNGAP1Q96PV0 1343 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 A0A1B0GUA9 196 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TGFB1I1O43294 461 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TMEM253P0C7T8 217 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 EIF3BP55884 814 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ATP11AP98196 1134 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DDR1Q08345 913 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LRRD1A4D1F6 860 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SKOR1P84550 965 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MTMR1Q13613 665 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ANKMY2Q8IV38 441 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 IFT74Q96LB3 600 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TMEM39BQ9GZU3 492 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 IQCGQ9H095 443 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LRRC4CQ9HCJ2 640 aa15.4■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SCP2P22307 547 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ITIH3Q06033 890 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPP3CAQ08209 521 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 BYSLQ13895 437 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 BSPRYQ5W0U4 402 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRIM7Q9C029 511 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PABPC3Q9H361 631 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CXorf56Q9H5V9 222 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CNOT10Q9H9A5 744 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NXF1Q9UBU9 619 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SPEF2Q9C093 1822 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ADCY2Q08462 1091 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZNF720Q7Z2F6 126 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TGS1Q96RS0 853 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PITPNM3Q9BZ71 974 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 F5H423 210 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PIK3R2O00459 728 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CREB1P16220 341 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 IRX4P78413 519 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPATQ06203 517 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RC3H1Q5TC82 1133 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 LIN9Q5TKA1 542 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SPOPLQ6IQ16 392 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 NCAPGQ9BPX3 1015 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ECT2Q9H8V3 914 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ACTR5Q9H9F9 607 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ETNK1Q9HBU6 452 aa15.39■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZC3H4Q9UPT8 1303 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 KRT10P13645 584 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 IL1R1P14778 569 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CHRNA3P32297 505 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 STRN3Q13033 797 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRAF1Q13077 416 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 BRDTQ58F21 947 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PPP1R21Q6ZMI0 780 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZNF662Q6ZS27 426 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SLC17A8Q8NDX2 589 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CALR3Q96L12 384 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 GLIS2Q9BZE0 524 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ZWILCHQ9H900 591 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 EXOC7Q9UPT5 735 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TRAF3IP3Q9Y228 551 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 DUOX1Q9NRD9 1551 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SMARCA1P28370 1054 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RASA3Q14644 834 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 CDR2LQ86X02 465 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SP8Q8IXZ3 490 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TAS1R2Q8TE23 839 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 ATP8B4Q8TF62 1192 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 PRCCQ92733 491 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 SLC5A5Q92911 643 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 TATDN2Q93075 761 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 RMDN3Q96TC7 470 aa15.38■□□□□ 0.05
TNFRSF1B-201ENST00000376259 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms