RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 A0A1W2PQJ5 194 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 H0YCG3 227 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 HAS3O00219 553 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 NPTX2P47972 431 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 SYCP1Q15431 976 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 EXOC8Q8IYI6 725 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 C7orf31Q8N865 590 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 TMEM161BQ8NDZ6 487 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 BBXQ8WY36 941 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-201ENST00000376228 ARMCX3Q9UH62 379 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-201ENST00000376228 NOD1Q9Y239 953 aa23.13■■□□□ 1.29
HLA-C-201ENST00000376228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.13■■□□□ 1.29
HLA-C-201ENST00000376228 EPB41P11171 864 aaKnown RBP23.12■■□□□ 1.29
HLA-C-201ENST00000376228 PTPN11Q06124 597 aaPredicted RBP23.12■■□□□ 1.29
HLA-C-201ENST00000376228 EMC2Q15006 297 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 PTGISQ16647 500 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 MTERF2Q49AM1 385 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 BORCS6Q96GS4 357 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 LRCH3Q96II8 777 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 EDEM3Q9BZQ6 932 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 WNT8AQ9H1J5 351 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 GTF2IRD1Q9UHL9 959 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 EXOC7Q9UPT5 735 aa23.12■■□□□ 1.29
HLA-C-201ENST00000376228 H3BRB1 525 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 AKAP3O75969 853 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 PSMC2P35998 433 aaKnown RBP23.11■■□□□ 1.29
HLA-C-201ENST00000376228 SYCP3Q8IZU3 236 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 TMEM199Q8N511 208 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 SCLYQ96I15 445 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 IFT74Q96LB3 600 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 SMARCAD1Q9H4L7 1026 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 TUT1Q9H6E5 874 aaKnown RBP23.11■■□□□ 1.29
HLA-C-201ENST00000376228 SIP14410 1827 aa23.11■■□□□ 1.29
HLA-C-201ENST00000376228 TTC26A0AVF1 554 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 CLIC2O15247 247 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 GAS2O43903 313 aaKnown RBP23.1■■□□□ 1.29
HLA-C-201ENST00000376228 ACRP10323 421 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 POLGP54098 1239 aaPredicted RBP23.1■■□□□ 1.29
HLA-C-201ENST00000376228 MCCD1P59942 119 aaPredicted RBP23.1■■□□□ 1.29
HLA-C-201ENST00000376228 ZNF200P98182 395 aaPredicted RBP23.1■■□□□ 1.29
HLA-C-201ENST00000376228 GOLGA8FQ08AF8 430 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 GOLGA8DPQ0D2H9 430 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 HIC1Q14526 733 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 TRMT1LQ7Z2T5 733 aaKnown RBP23.1■■□□□ 1.29
HLA-C-201ENST00000376228 SESTD1Q86VW0 696 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 MAP4K3Q8IVH8 894 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 ATP8B4Q8TF62 1192 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 DNAJC7Q99615 494 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 KMT5AQ9NQR1 393 aa23.1■■□□□ 1.29
HLA-C-201ENST00000376228 LUC7L2Q9Y383 392 aaKnown RBP23.1■■□□□ 1.29
HLA-C-201ENST00000376228 KAT6AQ92794 2004 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 MAPK13O15264 365 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 SLC16A4O15374 487 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 MAFO75444 373 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-201ENST00000376228 ARL2P36404 184 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 PPP2R5AQ15172 486 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 KSR1Q8IVT5 923 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 CCAR2Q8N163 923 aaKnown RBP23.09■■□□□ 1.29
HLA-C-201ENST00000376228 C17orf53Q8N3J3 647 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-201ENST00000376228 OR8K1Q8NGG5 319 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 CPLX3Q8WVH0 158 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 SLC7A3Q8WY07 619 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 BSNDQ8WZ55 320 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 ABHD10Q9NUJ1 306 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 ARHGAP28Q9P2N2 729 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 TBX20Q9UMR3 447 aa23.09■■□□□ 1.29
HLA-C-201ENST00000376228 RNF225M0QZC1 329 aaPredicted RBP23.08■■□□□ 1.29
HLA-C-201ENST00000376228 CCP110O43303 1012 aa23.08■■□□□ 1.29
HLA-C-201ENST00000376228 KRT9P35527 623 aa23.08■■□□□ 1.29
HLA-C-201ENST00000376228 PPIGQ13427 754 aaKnown RBP eCLIP23.08■■□□□ 1.29
HLA-C-201ENST00000376228 E4F1Q66K89 784 aaPredicted RBP23.08■■□□□ 1.29
HLA-C-201ENST00000376228 C16orf59Q7L2K0 433 aa23.08■■□□□ 1.29
HLA-C-201ENST00000376228 POLR3FQ9H1D9 316 aaPredicted RBP23.08■■□□□ 1.29
HLA-C-201ENST00000376228 CCDC169A6NNP5 214 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 RBAK-RBAKDNI3L0D1 243 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 OFD1O75665 1012 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 TRIM21P19474 475 aaKnown RBP23.08■■□□□ 1.28
HLA-C-201ENST00000376228 CASP4P49662 377 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 ZBED6P86452 979 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 KCNMA1Q12791 1236 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 KCNH2Q12809 1159 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 LRIT3Q3SXY7 679 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 TMTC1Q8IUR5 882 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 FAM186BQ8IYM0 893 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 GLG1Q92896 1179 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.08■■□□□ 1.283e-7■■□□□ 12.7
HLA-C-201ENST00000376228 FRMD4BQ9Y2L6 1034 aa23.08■■□□□ 1.28
HLA-C-201ENST00000376228 GTPBP10A4D1E9 387 aaKnown RBP23.07■■□□□ 1.28
HLA-C-201ENST00000376228 AFPP02771 609 aaKnown RBP23.07■■□□□ 1.28
HLA-C-201ENST00000376228 SMIM10L2AP0DMW4 78 aa23.07■■□□□ 1.28
HLA-C-201ENST00000376228 SMIM10L2BP0DMW5 78 aa23.07■■□□□ 1.28
HLA-C-201ENST00000376228 NAMPTP43490 491 aa23.07■■□□□ 1.28
HLA-C-201ENST00000376228 PLCB4Q15147 1175 aa23.07■■□□□ 1.28
HLA-C-201ENST00000376228 DHX38Q92620 1227 aaKnown RBP23.07■■□□□ 1.28
HLA-C-201ENST00000376228 RNPC3Q96LT9 517 aaKnown RBP23.07■■□□□ 1.28
HLA-C-201ENST00000376228 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-201ENST00000376228 ZNF215Q9UL58 517 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-201ENST00000376228 IGKV6-21A0A0C4DH24 114 aa23.06■■□□□ 1.28
HLA-C-201ENST00000376228 DENND3A2RUS2 1198 aa23.06■■□□□ 1.28
HLA-C-201ENST00000376228 HBP1O60381 514 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms