RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CCNE1P24864 410 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 SFSWAPQ12872 951 aaKnown RBP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 MTMR2Q13614 643 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 P2RX5Q93086 422 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 CYP39A1Q9NYL5 469 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 ATXN10Q9UBB4 475 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 NKX1-2Q9UD57 310 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 UTP11Q9Y3A2 253 aaKnown RBP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 ZHX2Q9Y6X8 837 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 MYL1P05976 194 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 MUM1Q2TAK8 710 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 LCA5Q86VQ0 697 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 LONP2Q86WA8 852 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-203ENST00000375315 PIGOQ8TEQ8 1089 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
C9orf3-203ENST00000375315 PGRMC1O00264 195 aaKnown RBP13.05□□□□□ -0.32
C9orf3-203ENST00000375315 AGTP01019 485 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 STAT2P52630 851 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 MYBPC3Q14896 1274 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-203ENST00000375315 OR52E8Q6IFG1 317 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 ACTRT1Q8TDG2 376 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 EEF2KMTQ96G04 330 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 FMO2Q99518 471 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 ADAM7Q9H2U9 754 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 SLITRK6Q9H5Y7 841 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 ETNK1Q9HBU6 452 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-203ENST00000375315 RBAK-RBAKDNI3L0D1 243 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 RHOBTB3O94955 611 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 TPBGLP0DKB5 382 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 SNHG28P0DPA3 235 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 SCNN1BP51168 640 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 DTHD1Q6ZMT9 781 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 TEPSINQ96N21 525 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 FAM192AQ9GZU8 254 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 TXLNGQ9NUQ3 528 aa13.05□□□□□ -0.32
C9orf3-203ENST00000375315 ECEL1O95672 775 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 NUDT17P0C025 328 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 CCNB1P14635 433 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 PPP1R2P41236 205 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 ARHGAP18Q8N392 663 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 IFT43Q96FT9 208 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 GBP5Q96PP8 586 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 NDNQ99608 321 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
C9orf3-203ENST00000375315 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 TRIM33Q9UPN9 1127 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 SIK3Q9Y2K2 1263 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-203ENST00000375315 SLC37A4O43826 429 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 PENKP01210 267 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-203ENST00000375315 ASNSP08243 561 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 KLRC1P26715 233 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 C6orf118Q5T5N4 469 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 PDXDC1Q6P996 788 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 TAOK1Q7L7X3 1001 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 FAM83AQ86UY5 434 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 RBBP8NLQ8NC74 664 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-203ENST00000375315 ASAP3Q8TDY4 903 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 AP1M1Q9BXS5 423 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 AZI2Q9H6S1 392 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 TMCO1Q9UM00 188 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 ZNF232Q9UNY5 417 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 SMCHD1A6NHR9 2005 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 POTEMA6NI47 508 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 KRIT1O00522 736 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 EPHB6O15197 1021 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 PEX11AO75192 247 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 GJB6O95452 261 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 UBA7P41226 1012 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 HMGCS2P54868 508 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
C9orf3-203ENST00000375315 VWA3BQ502W6 1294 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 PPP1R12CQ9BZL4 782 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 EDEM3Q9BZQ6 932 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 LRCH1Q9Y2L9 728 aa13.04□□□□□ -0.32
C9orf3-203ENST00000375315 ATRNL1Q5VV63 1379 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-203ENST00000375315 ATP5HO75947 161 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 UNC5CO95185 931 aa13.03□□□□□ -0.32
C9orf3-203ENST00000375315 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
C9orf3-203ENST00000375315 LONP1P36776 959 aaKnown RBP13.03□□□□□ -0.32
C9orf3-203ENST00000375315 ZNF280AP59817 542 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms