RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 RPS6KL1Q9Y6S9 549 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 TMCO5BA8MYB1 307 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 ZNF185O15231 689 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 TFRCP02786 760 aaKnown RBP8.88□□□□□ -0.99
UBR4-202ENST00000375224 VSNL1P62760 191 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 VGLL4Q14135 290 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 ZRSR2Q15696 482 aaKnown RBP8.88□□□□□ -0.99
UBR4-202ENST00000375224 GLE1Q53GS7 698 aaKnown RBP8.88□□□□□ -0.99
UBR4-202ENST00000375224 MEI1Q5TIA1 1274 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 LBX2Q6XYB7 198 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.88□□□□□ -0.99
UBR4-202ENST00000375224 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
UBR4-202ENST00000375224 CBWD1Q9BRT8 395 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 ABCB6Q9NP58 842 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.88□□□□□ -0.991e-6■■■■■ 63.3
UBR4-202ENST00000375224 NENFQ9UMX5 172 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 LOC285556D6RIA3 1793 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 WDR90Q96KV7 1748 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 POLR2AP24928 1970 aaKnown RBP8.88□□□□□ -0.99
UBR4-202ENST00000375224 MAP2K7O14733 419 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 SUPT20HL2P0C7V6 817 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 TNFAIP3P21580 790 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 GTF2H1P32780 548 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 COPB2P35606 906 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 NFRKBQ6P4R8 1299 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 SPATA4Q8NEY3 305 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 GPRC5CQ9NQ84 441 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 CYP26B1Q9NR63 512 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 PSD3Q9NYI0 1048 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 ADAM21Q9UKJ8 722 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 L1RE1Q9UN81 338 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 FZD1Q9UP38 647 aa8.88□□□□□ -0.99
UBR4-202ENST00000375224 IGSF9BQ9UPX0 1349 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 DENND3A2RUS2 1198 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 ANKRD65E5RJM6 399 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 KIAA0391O15091 583 aaKnown RBP8.87□□□□□ -0.99
UBR4-202ENST00000375224 RGS20O76081 388 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 MXI1P50539 228 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 PPATQ06203 517 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 PRKG1Q13976 671 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 RPS6KA1Q15418 735 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 GJB7Q6PEY0 223 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 U2AF1L4Q8WU68 220 aaKnown RBP8.87□□□□□ -0.99
UBR4-202ENST00000375224 PBKQ96KB5 322 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 FAM81BQ96LP2 452 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 SELENOOQ9BVL4 669 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 KIAA1586Q9HCI6 787 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 SEPT9Q9UHD8 586 aaPredicted RBP8.87□□□□□ -0.99
UBR4-202ENST00000375224 MYH9P35579 1960 aaKnown RBP8.87□□□□□ -0.99
UBR4-202ENST00000375224 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
UBR4-202ENST00000375224 CXCL11O14625 94 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 ZNF862O60290 1169 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 STBD1O95210 358 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 GARTP22102 1010 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 CNGA1P29973 690 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 PRKCEQ02156 737 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 KIF22Q14807 665 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 EPC2Q52LR7 807 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 BRDTQ58F21 947 aaPredicted RBP8.87□□□□□ -0.99
UBR4-202ENST00000375224 SLC30A5Q8TAD4 765 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 COG1Q8WTW3 980 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 KCNN1Q92952 543 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 PACSIN1Q9BY11 444 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 KDM4CQ9H3R0 1056 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 SPON1Q9HCB6 807 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 PDLIM7Q9NR12 457 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 SBF1O95248 1867 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 ARID2Q68CP9 1835 aa8.87□□□□□ -0.99
UBR4-202ENST00000375224 TMEM150BA6NC51 233 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 DDX3XO00571 662 aaKnown RBP eCLIP8.86□□□□□ -0.99
UBR4-202ENST00000375224 COQ9O75208 318 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 ATG7O95352 703 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 SNRNP35Q16560 246 aaKnown RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 LMO3Q8TAP4 145 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 UBE2TQ9NPD8 197 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 ZNF302Q9NR11 478 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 AJAP1Q9UKB5 411 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 PPME1Q9Y570 386 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 SLC25A27O95847 323 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 TMEM253P0C7T8 217 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 TGFB3P10600 412 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 ALDH5A1P51649 535 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 C2orf54Q08AI8 447 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 PDCD2Q16342 344 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 ARHGAP44Q17R89 818 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 KRT39Q6A163 491 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 TRMT1LQ7Z2T5 733 aaKnown RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 ERO1BQ86YB8 467 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 CCDC60Q8IWA6 550 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 CTNNBL1Q8WYA6 563 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 THOC1Q96FV9 657 aaKnown RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 SH2D3AQ9BRG2 576 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 VIPAS39Q9H9C1 493 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 PTPRFP10586 1907 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 NCK2O43639 380 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 SASH3O75995 380 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 GCLMP48507 274 aa8.86□□□□□ -0.99
UBR4-202ENST00000375224 POLGP54098 1239 aaPredicted RBP8.86□□□□□ -0.99
UBR4-202ENST00000375224 MFAP3P55082 362 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms