RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 IARSP41252 1262 aaKnown RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 CYP4F8P98187 520 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 COG2Q14746 738 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 THOC7Q6I9Y2 204 aaKnown RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 RIN3Q8TB24 985 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 CCDC110Q8TBZ0 833 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 DDI1Q8WTU0 396 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 XAB2Q9HCS7 855 aaKnown RBP9.74□□□□□ -0.85
UBR4-201ENST00000375218 PCDHGB4Q9UN71 923 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 SPATA31A1Q5TZJ5 1347 aa9.74□□□□□ -0.85
UBR4-201ENST00000375218 RELQ04864 619 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 LRMPQ12912 555 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 C15orf59Q2T9L4 293 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 ZNF792Q3KQV3 632 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 ZNF600Q6ZNG1 722 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 NCCRP1Q6ZVX7 275 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 C10orf53Q8N6V4 93 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 DNAJC18Q9H819 358 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 ADAMTSL1Q8N6G6 1762 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 XIRP2A4UGR9 3374 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 PSDA5PKW4 1024 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 SOX11P35716 441 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 TUBA3CQ13748 450 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 CCDC40Q4G0X9 1142 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 ZBTB8BQ8NAP8 495 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 PIBF1Q8WXW3 757 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 C8orf76Q96K31 380 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 SMOC1Q9H4F8 434 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 BTG4Q9NY30 223 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.73□□□□□ -0.856e-11■□□□□ 8.3
UBR4-201ENST00000375218 TSPYL4Q9UJ04 414 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 TACC3Q9Y6A5 838 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 SEC24DO94855 1032 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 REC8O95072 547 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 EVI2BP34910 448 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 GSTO1P78417 241 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 TFAP4Q01664 338 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 LRRC71Q8N4P6 559 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 ST13P5Q8NFI4 369 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 FAM167AQ96KS9 214 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 ATP6V1G3Q96LB4 118 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 DCTPP1Q9H773 170 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 WDR6Q9NNW5 1121 aaKnown RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 ANO10Q9NW15 660 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 TUBA8Q9NY65 449 aaPredicted RBP9.73□□□□□ -0.85
UBR4-201ENST00000375218 TMED5Q9Y3A6 229 aa9.73□□□□□ -0.85
UBR4-201ENST00000375218 EXTL3O43909 919 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 TMEM62Q0P6H9 643 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 SSPNQ14714 243 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 NUTM1Q86Y26 1132 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 ZNF566Q969W8 418 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 ACAP3Q96P50 834 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 IFNB1P01574 187 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 CCND1P24385 295 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 CETN2P41208 172 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 AP3M2P53677 418 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 VEPH1Q14D04 833 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 STK38Q15208 465 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 DCAF17Q5H9S7 520 aaPredicted RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 CLEC2AQ6UVW9 174 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 SUCLG2Q96I99 432 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 TRAF3IP3Q9Y228 551 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 WDR19Q8NEZ3 1342 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 REV3LO60673 3130 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 DDX11L8A8MPP1 907 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 GOLGA8MH3BSY2 632 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 CTNND1O60716 968 aaKnown RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 WEE1P30291 646 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 IFNAR2P48551 515 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 CACNB3P54284 484 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 CENPCQ03188 943 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 MDH1BQ5I0G3 518 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 RIOK1Q9BRS2 568 aaKnown RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 UTP14AQ9BVJ6 771 aaKnown RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 IKBKBO14920 756 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 YEATS4O95619 227 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 BASP1P80723 227 aaKnown RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 RPS26P11Q5JNZ5 115 aaPredicted RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 KLHDC4Q8TBB5 520 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 WNT5BQ9H1J7 359 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 THAP9Q9H5L6 903 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 ADD3Q9UEY8 706 aaKnown RBP9.72□□□□□ -0.85
UBR4-201ENST00000375218 SNX8Q9Y5X2 465 aa9.72□□□□□ -0.85
UBR4-201ENST00000375218 ENC1O14682 589 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 LTA4HP09960 611 aaKnown RBP9.71□□□□□ -0.85
UBR4-201ENST00000375218 MCM3P25205 808 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 MAPK3P27361 379 aaPredicted RBP9.71□□□□□ -0.85
UBR4-201ENST00000375218 GCKP35557 465 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 ID4P47928 161 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 DDR2Q16832 855 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 TYW1BQ6NUM6 668 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 TTLL7Q6ZT98 887 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 PDZD4Q76G19 769 aaPredicted RBP9.71□□□□□ -0.85
UBR4-201ENST00000375218 ZNF804AQ7Z570 1209 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 PACSIN1Q9BY11 444 aa9.71□□□□□ -0.85
UBR4-201ENST00000375218 TBC1D29Q9UFV1 150 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms