RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NOP56O00567 594 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ENC1O14682 589 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 MOCS3O95396 460 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 STRN3Q13033 797 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 HSDL1Q3SXM5 330 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ARMCX2Q7L311 632 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ZNF467Q7Z7K2 595 aaPredicted RBP19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 DHX37Q8IY37 1157 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GPR161Q8N6U8 529 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 OLIG1Q8TAK6 271 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 DEPTORQ8TB45 409 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ATP8B4Q8TF62 1192 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 BICD1Q96G01 975 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SYT11Q9BT88 431 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TMEM8AQ9HCN3 771 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 SALL4Q9UJQ4 1053 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 NAGPAQ9UK23 515 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 EVPLQ92817 2033 aa19.53■□□□□ 0.72
HLA-DQB1-201ENST00000374943 LRRIQ3A6PVS8 624 aaPredicted RBP19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 STRNO43815 780 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PRLRP16471 622 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 LIG4P49917 911 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 KIF22Q14807 665 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ENOX2Q16206 610 aaKnown RBP19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 KRT39Q6A163 491 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 DNAJC5GQ8N7S2 189 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 PDCL3Q9H2J4 239 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 VTA1Q9NP79 307 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 INTUQ9ULD6 942 aa19.52■□□□□ 0.72
HLA-DQB1-201ENST00000374943 IGKV6-21A0A0C4DH24 114 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 EXTL3O43909 919 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TXNP10599 105 aaKnown RBP19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 KIAA0753Q2KHM9 967 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 IER5Q5VY09 327 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SPRYD7Q5W111 196 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 FBXO38Q6PIJ6 1188 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ANKRD13CQ8N6S4 541 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 C2orf69Q8N8R5 385 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SLC30A5Q8TAD4 765 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 GLG1Q92896 1179 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SPATA33Q96N06 139 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 HDAC6Q9UBN7 1215 aa19.52■□□□□ 0.71
HLA-DQB1-201ENST00000374943 RBM47A0AV96 593 aaKnown RBP19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CTAGE15A4D2H0 777 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 LRRIQ4A6NIV6 560 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CTAGE8P0CG41 777 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ADORA2AP29274 412 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CAPSQ13938 189 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PLCB4Q15147 1175 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TEX35Q5T0J7 233 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SLFN12LQ6IEE8 588 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ALKBH5Q6P6C2 394 aaKnown RBP19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CTAGE6Q86UF2 777 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CTAGE4Q8IX94 777 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TCP11Q8WWU5 503 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SNX12Q9UMY4 172 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PCDHGC5Q9Y5F6 944 aa19.51■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ZNF233A6NK53 670 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ZBTB42B2RXF5 422 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 K7ERI5 159 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 DDX3XO00571 662 aaKnown RBP eCLIP19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ADCY3O60266 1144 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PNMA6AP0CW24 399 aaPredicted RBP19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 KLRC1P26715 233 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 GPC3P51654 580 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CLDN10P78369 228 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CKAP4Q07065 602 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ARHGEF19Q8IW93 802 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PSPC1Q8WXF1 523 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 RPGRIP1Q96KN7 1286 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PARK7Q99497 189 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 JPH2Q9BR39 696 aaPredicted RBP19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SMARCAD1Q9H4L7 1026 aa19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PUF60Q9UHX1 559 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB1-201ENST00000374943 EFNA5P52803 228 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PSMD6Q15008 389 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CDCA2Q69YH5 1023 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TAPT1Q6NXT6 567 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TRIM50Q86XT4 487 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 LNX1Q8TBB1 728 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CCDC127Q96BQ5 260 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PACSIN1Q9BY11 444 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 UBE2TQ9NPD8 197 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PDGFCQ9NRA1 345 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TSKSQ9UJT2 592 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 A0A0A6YYK5 440 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CELF2O95319 508 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TFRCP02786 760 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MAP2K1Q02750 393 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ARHGAP1Q07960 439 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 LAMC2Q13753 1193 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MXD4Q14582 209 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ARHGAP44Q17R89 818 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 FBXL13Q8NEE6 735 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 COPS5Q92905 334 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 EMID1Q96A84 441 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 FAM213AQ9BRX8 229 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 AGO2Q9UKV8 859 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 IVNS1ABPQ9Y6Y0 642 aa19.49■□□□□ 0.71
HLA-DQB1-201ENST00000374943 FOXN3O00409 490 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms