RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 C4BPAP04003 597 aaKnown RBP5.77□□□□□ -1.49
USP48-202ENST00000374730 INSRRP14616 1297 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 KRT15P19012 456 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 SDSP20132 328 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 PTGS1P23219 599 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 POLD1P28340 1107 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 EIF4A1P60842 406 aaKnown RBP5.77□□□□□ -1.49
USP48-202ENST00000374730 ATP8B2P98198 1209 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 USP10Q14694 798 aaKnown RBP5.77□□□□□ -1.49
USP48-202ENST00000374730 PLEKHO1Q53GL0 409 aaPredicted RBP5.77□□□□□ -1.49
USP48-202ENST00000374730 C2orf27AQ580R0 203 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 CASC1Q6TDU7 716 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 SLC4A10Q6U841 1118 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 LTV1Q96GA3 475 aaPredicted RBP5.77□□□□□ -1.49
USP48-202ENST00000374730 MAGEB10Q96LZ2 347 aaPredicted RBP5.77□□□□□ -1.49
USP48-202ENST00000374730 JADE2Q9NQC1 790 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 SFMBT1Q9UHJ3 866 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 HEG1Q9ULI3 1381 aa5.77□□□□□ -1.49
USP48-202ENST00000374730 PRAMEF25A6NGN4 478 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 REC8O95072 547 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 NPTXRO95502 500 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 GCP02774 474 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 HSP90AB1P08238 724 aaKnown RBP5.76□□□□□ -1.49
USP48-202ENST00000374730 PTMSP20962 102 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 DNM2P50570 870 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 PDE1AP54750 535 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 TOP3AQ13472 1001 aaPredicted RBP5.76□□□□□ -1.49
USP48-202ENST00000374730 PUM1Q14671 1186 aaKnown RBP eCLIP5.76□□□□□ -1.499e-6■■□□□ 13.5
USP48-202ENST00000374730 ICAM4Q14773 271 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 ZNF530Q6P9A1 599 aaPredicted RBP5.76□□□□□ -1.49
USP48-202ENST00000374730 CXXC5Q7LFL8 322 aaKnown RBP5.76□□□□□ -1.49
USP48-202ENST00000374730 NOSTRINQ8IVI9 506 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 C16orf71Q8IYS4 520 aaPredicted RBP5.76□□□□□ -1.49
USP48-202ENST00000374730 ANKRD13AQ8IZ07 590 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 SLC7A14Q8TBB6 771 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 OTUD7AQ8TE49 926 aaPredicted RBP5.76□□□□□ -1.49
USP48-202ENST00000374730 SSH3Q8TE77 659 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 CD248Q9HCU0 757 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 INCENPQ9NQS7 918 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 BTBD7Q9P203 1132 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 STAP2Q9UGK3 403 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 ST6GALNAC2Q9UJ37 374 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 FBXO10Q9UK96 956 aa5.76□□□□□ -1.49
USP48-202ENST00000374730 PATE3B3GLJ2 98 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 ERC2O15083 957 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 RNMTO43148 476 aaKnown RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 EPB41L2O43491 1005 aaKnown RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 RAB11FIP3O75154 756 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 RASGRP1O95267 797 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 UBTFL1P0CB47 393 aaPredicted RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 ETV4P43268 484 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 TEFQ10587 303 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 STILQ15468 1287 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 ZNF568Q3ZCX4 644 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 GPR155Q7Z3F1 870 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 NOP9Q86U38 636 aaKnown RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 CISD2Q8N5K1 135 aaKnown RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 IL17RAQ96F46 866 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 ORAI2Q96SN7 254 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 CDK5RAP1Q96SZ6 601 aaKnown RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 LRRCC1Q9C099 1032 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 USP44Q9H0E7 712 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 OSBPL2Q9H1P3 480 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 GALNT8Q9NY28 637 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 TSC22D4Q9Y3Q8 395 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 LRRFIP2Q9Y608 721 aaKnown RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 PTCH2Q9Y6C5 1203 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 AFDNP55196 1824 aaKnown RBP5.75□□□□□ -1.49
USP48-202ENST00000374730 ADCY9O60503 1353 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 GLI3P10071 1580 aa5.75□□□□□ -1.49
USP48-202ENST00000374730 TNS3Q68CZ2 1445 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 ABCA3Q99758 1704 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 PNMA6EA0A0J9YXQ4 647 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 TNFRSF1AP19438 455 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 MX1P20591 662 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 IL13RA1P78552 427 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 MTX1Q13505 466 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 ZMAT1Q5H9K5 638 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 C1orf141Q5JVX7 400 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 BEND3Q5T5X7 828 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 L1TD1Q5T7N2 865 aaKnown RBP5.74□□□□□ -1.49
USP48-202ENST00000374730 CLEC17AQ6ZS10 378 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 KRT28Q7Z3Y7 464 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 BRAPQ7Z569 592 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 DNAAF4Q8WXU2 420 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 LRRC59Q96AG4 307 aaKnown RBP5.74□□□□□ -1.49
USP48-202ENST00000374730 SCLYQ96I15 445 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 SCYL1Q96KG9 808 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 GBP4Q96PP9 640 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 BTBD2Q9BX70 525 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 SEMA4AQ9H3S1 761 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 NCOA5Q9HCD5 579 aaKnown RBP5.74□□□□□ -1.49
USP48-202ENST00000374730 KCNH7Q9NS40 1196 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 DBF4Q9UBU7 674 aaPredicted RBP5.74□□□□□ -1.49
USP48-202ENST00000374730 EXOC6BQ9Y2D4 811 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 COQ6Q9Y2Z9 468 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 UBR2Q8IWV8 1755 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 ARFGEF2Q9Y6D5 1785 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 PAPPAQ13219 1627 aa5.74□□□□□ -1.49
USP48-202ENST00000374730 KDM6AO15550 1401 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms