RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 OR1G1P47890 313 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 USP11P51784 963 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 FGD1P98174 961 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 DSG1Q02413 1049 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 PRKCQQ04759 706 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 HTR4Q13639 388 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 SRGAP1Q7Z6B7 1085 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 GPR65Q8IYL9 337 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 ATRIPQ8WXE1 791 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 C22orf23Q9BZE7 217 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 SPATA6Q9NWH7 488 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 CDV3Q9UKY7 258 aaKnown RBP16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 BRPF3Q9ULD4 1205 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 NUMBLQ9Y6R0 609 aa16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 KMT2BQ9UMN6 2715 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-202ENST00000373711 KANSL1LA0AUZ9 987 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 B4GALT3O60512 393 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 ITGA4P13612 1032 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 PFKPQ01813 784 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 COL9A3Q14050 684 aaPredicted RBP16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 RSPO2Q6UXX9 243 aaPredicted RBP16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 MTSS1LQ765P7 747 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 HACE1Q8IYU2 909 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 ZNF707Q96C28 371 aaPredicted RBP16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 OSBPL6Q9BZF3 934 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 PRKD2Q9BZL6 878 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 FOXQ1Q9C009 403 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 MARCH5Q9NX47 278 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 PPME1Q9Y570 386 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 COL4A3BPQ9Y5P4 624 aa16.6■□□□□ 0.25
CDKN1A-202ENST00000373711 DDX11L8A8MPP1 907 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 GAS2O43903 313 aaKnown RBP16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 ERLIN2O94905 339 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 HMGB1P09429 215 aaKnown RBP16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 CDC27P30260 824 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 NCBP1Q09161 790 aaKnown RBP16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 KRT32Q14532 448 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 PCBP1Q15365 356 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 COLGALT2Q8IYK4 626 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 RNF168Q8IYW5 571 aaPredicted RBP16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 CCDC51Q96ER9 411 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 COLEC11Q9BWP8 271 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
CDKN1A-202ENST00000373711 NCAM2O15394 837 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 KRT37O76014 449 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 FSHRP23945 695 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 PSMC5P62195 406 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 EXOSC10Q01780 885 aaKnown RBP16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 MLF2Q15773 248 aaPredicted RBP16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 USP41Q3LFD5 358 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 PALB2Q86YC2 1186 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 CEP89Q96ST8 783 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 RTKNQ9BST9 563 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 IFT122Q9HBG6 1241 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 SPTBN2O15020 2390 aa16.58■□□□□ 0.24
CDKN1A-202ENST00000373711 POTEMA6NI47 508 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 TGM5O43548 720 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 PSMD10O75832 226 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 AXLP30530 894 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 UBXN2BQ14CS0 331 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 C8orf34Q49A92 452 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 Q4G0T1 1027 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 LIN9Q5TKA1 542 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 POTEGQ6S5H5 508 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 KSR1Q8IVT5 923 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 TCP11Q8WWU5 503 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 CHST7Q9NS84 486 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 ZSCAN32Q9NX65 697 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 GMEB2Q9UKD1 530 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 CDH7Q9ULB5 785 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 SMG5Q9UPR3 1016 aaKnown RBP16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
CDKN1A-202ENST00000373711 ARID2Q68CP9 1835 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 ASAP2O43150 1006 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 ZMYND10O75800 440 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 SPATA31D3P0C874 917 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 MYBP10242 640 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 GLULP15104 373 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 ADD1P35611 737 aaKnown RBP16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 RFC5P40937 340 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 ATXN1P54253 815 aaKnown RBP16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 GPC5P78333 572 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 CSTF1Q05048 431 aaKnown RBP16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 DSC1Q08554 894 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 FUT10Q6P4F1 479 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 NOTUMQ6P988 496 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 SPATA31D4Q6ZUB0 917 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 TAS1R1Q7RTX1 841 aa16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 MAML2Q8IZL2 1156 aaPredicted RBP16.56■□□□□ 0.24
CDKN1A-202ENST00000373711 NELL2Q99435 816 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms