RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 NOTUMQ6P988 496 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 CLEC17AQ6ZS10 378 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 FAM178BQ8IXR5 827 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 CNNM3Q8NE01 707 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 CLP1Q92989 425 aaKnown RBP20.18■□□□□ 0.82
PBX3-205ENST00000373492 C7orf25Q9BPX7 421 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 C17orf80Q9BSJ5 609 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 PANK4Q9NVE7 773 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 MTUS1Q9ULD2 1270 aa20.18■□□□□ 0.82
PBX3-205ENST00000373492 K7ENM7 598 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 ACKR2O00590 384 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 HOXA2O43364 376 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 GTPBP6O43824 516 aaPredicted RBP20.17■□□□□ 0.82
PBX3-205ENST00000373492 EOMESO95936 686 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 SKIP12755 728 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 FAM160A1Q05DH4 1040 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 AMHR2Q16671 573 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 EPC2Q52LR7 807 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 HERC4Q5GLZ8 1057 aaPredicted RBP20.17■□□□□ 0.82
PBX3-205ENST00000373492 KANK3Q6NY19 840 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 CNNM4Q6P4Q7 775 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 SFR1Q86XK3 245 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 ECHDC2Q86YB7 292 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 TMEM192Q8IY95 271 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 FBXO22Q8NEZ5 403 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 CCDC51Q96ER9 411 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 LMCD1Q9NZU5 365 aa20.17■□□□□ 0.82
PBX3-205ENST00000373492 PDCD11Q14690 1871 aaKnown RBP20.16■□□□□ 0.82
PBX3-205ENST00000373492 LPXNO60711 386 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 MYL1P05976 194 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 RB1P06400 928 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 MAPTP10636 758 aaKnown RBP20.16■□□□□ 0.82
PBX3-205ENST00000373492 ARF4P18085 180 aaPredicted RBP20.16■□□□□ 0.82
PBX3-205ENST00000373492 IBSPP21815 317 aaPredicted RBP20.16■□□□□ 0.82
PBX3-205ENST00000373492 RAB27AP51159 221 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 UBE2HP62256 183 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 KRBA2Q6ZNG9 492 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 HAUS6Q7Z4H7 955 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 FMR1NBQ8N0W7 255 aaPredicted RBP20.16■□□□□ 0.82
PBX3-205ENST00000373492 TMEM161BQ8NDZ6 487 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 PAGE5Q96GU1 130 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 CPB2Q96IY4 423 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 CNTNAP2Q9UHC6 1331 aa20.16■□□□□ 0.82
PBX3-205ENST00000373492 FRMD3A2A2Y4 597 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 C5orf67F2Z3F1 127 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 N4BP3O15049 544 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 B4GALT5O43286 388 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 PRPF40AO75400 957 aaKnown RBP20.15■□□□□ 0.82
PBX3-205ENST00000373492 LINC00271P0C7V0 271 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 HOXA11P31270 313 aaPredicted RBP20.15■□□□□ 0.82
PBX3-205ENST00000373492 BMPR1AP36894 532 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 SLC27A1Q6PCB7 646 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 ZNF598Q86UK7 904 aaKnown RBP20.15■□□□□ 0.82
PBX3-205ENST00000373492 GRAMD1CQ8IYS0 662 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 ADPGKQ9BRR6 497 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 MRPL4Q9BYD3 311 aaKnown RBP20.15■□□□□ 0.82
PBX3-205ENST00000373492 TRIM6Q9C030 488 aaPredicted RBP20.15■□□□□ 0.82
PBX3-205ENST00000373492 BLZF1Q9H2G9 400 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 MRPL44Q9H9J2 332 aaKnown RBP20.15■□□□□ 0.82
PBX3-205ENST00000373492 FAM105AQ9NUU6 356 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 MTCH2Q9Y6C9 303 aa20.15■□□□□ 0.82
PBX3-205ENST00000373492 A0A1B0GUA9 196 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 TBKBP1A7MCY6 615 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 GOLGA6L22H0YM25 854 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 H3BNC9 293 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 ZNF623O75123 536 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 GADD45BO75293 160 aaPredicted RBP20.14■□□□□ 0.81
PBX3-205ENST00000373492 NMT1P30419 496 aaKnown RBP20.14■□□□□ 0.81
PBX3-205ENST00000373492 COASYQ13057 564 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 CUL4BQ13620 913 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 UNC13DQ70J99 1090 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 APBB1IPQ7Z5R6 666 aaPredicted RBP20.14■□□□□ 0.81
PBX3-205ENST00000373492 GDPD5Q8WTR4 605 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 RSPH1Q8WYR4 309 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 PLVAPQ9BX97 442 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 TMEM117Q9H0C3 514 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 OLFML3Q9NRN5 406 aa20.14■□□□□ 0.81
PBX3-205ENST00000373492 MRPL42Q9Y6G3 142 aaKnown RBP20.14■□□□□ 0.81
PBX3-205ENST00000373492 PVALEFA0A1B0GWK0 134 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 FGFR1P11362 822 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 CTNNB1P35222 781 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 GATMP50440 423 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 SNW1Q13573 536 aaKnown RBP20.13■□□□□ 0.81
PBX3-205ENST00000373492 PAN2Q504Q3 1202 aaKnown RBP20.13■□□□□ 0.81
PBX3-205ENST00000373492 ATF7IP2Q5U623 682 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 ENGASEQ8NFI3 743 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 KCNN1Q92952 543 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 CCDC47Q96A33 483 aaKnown RBP20.13■□□□□ 0.81
PBX3-205ENST00000373492 HVCN1Q96D96 273 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 TIGD1Q96MW7 591 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 C11orf84Q9BUA3 381 aaPredicted RBP20.13■□□□□ 0.81
PBX3-205ENST00000373492 ST6GALNAC4Q9H4F1 302 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 TBC1D7Q9P0N9 293 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 HOOK1Q9UJC3 728 aaKnown RBP20.13■□□□□ 0.81
PBX3-205ENST00000373492 ANK1P16157 1881 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 TRANK1O15050 2925 aa20.13■□□□□ 0.81
PBX3-205ENST00000373492 KINO60870 393 aaKnown RBP20.12■□□□□ 0.81
PBX3-205ENST00000373492 ATF7P17544 494 aaPredicted RBP20.12■□□□□ 0.81
PBX3-205ENST00000373492 CASP1P29466 404 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms