RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 CCNI2Q6ZMN8 369 aaPredicted RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 PRPF38AQ8NAV1 312 aaKnown RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 MGARPQ8TDB4 240 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.31□□□□□ -0.69e-7■■■■■ 36.9
PGK1-201ENST00000373316 CHMP6Q96FZ7 201 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 SGSM3Q96HU1 749 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 TRIM56Q9BRZ2 755 aaKnown RBP11.31□□□□□ -0.6
PGK1-201ENST00000373316 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 MTMR4Q9NYA4 1195 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
PGK1-201ENST00000373316 KLRG2A4D1S0 409 aaPredicted RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 STXBP3O00186 592 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 PPP1R12AO14974 1030 aaPredicted RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 GAS2O43903 313 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 MAPTP10636 758 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 IL1R1P14778 569 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 DARS2Q6PI48 645 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 ATP11CQ8NB49 1132 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 CATSPER1Q8NEC5 780 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 ZNF564Q8TBZ8 553 aaPredicted RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 AGPAT1Q99943 283 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 PARVAQ9NVD7 372 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 ADAM22Q9P0K1 906 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 FLT1P17948 1338 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 GOLGA8MH3BSY2 632 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 MYO1CO00159 1063 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
PGK1-201ENST00000373316 MMEP08473 750 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 RFC5P40937 340 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 HNRNPH2P55795 449 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 RHBDL3P58872 404 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 UBE2SQ16763 222 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 NLRP14Q86W24 1093 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 WDR75Q8IWA0 830 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 CFAP61Q8NHU2 1237 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 LRGUKQ96M69 825 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 EPN3Q9H201 632 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 BATF3Q9NR55 127 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 MX2P20592 715 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 GUCY2CP25092 1073 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 GGCXP38435 758 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 FAM47CQ5HY64 1035 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 CRLF3Q8IUI8 442 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 RABEP2Q9H5N1 569 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 TOPORSQ9NS56 1045 aaPredicted RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 TLK1Q9UKI8 766 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 ARHGAP42A6NI28 874 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
PGK1-201ENST00000373316 CLIC2O15247 247 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 CCDC22O60826 627 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 GNAT1P11488 350 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 TAC1P20366 129 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 TMED2Q15363 201 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 ATL2Q8NHH9 583 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 MTRQ99707 1265 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 ANKEF1Q9NU02 776 aa11.3□□□□□ -0.6
PGK1-201ENST00000373316 CIITAP33076 1130 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 HSPA9P38646 679 aaKnown RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 LAMB3Q13751 1172 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 SCYL2Q6P3W7 929 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 KLC3Q6P597 504 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 GSDMBQ8TAX9 411 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 ANKS1AQ92625 1134 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 ANKRD27Q96NW4 1050 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 RPS6KC1Q96S38 1066 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 EHD4Q9H223 541 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 EGFRP00533 1210 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 KCNA3P22001 575 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 ZKSCAN8Q15776 578 aaPredicted RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 FBXL13Q8NEE6 735 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 GFM2Q969S9 779 aaKnown RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 EIF2AK1Q9BQI3 630 aaKnown RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 ISCUQ9H1K1 167 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 CACYBPQ9HB71 228 aaKnown RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 SLC38A10Q9HBR0 1119 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 STK38LQ9Y2H1 464 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 ZBED1O96006 694 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 CLTAP09496 248 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 DRAP1Q14919 205 aaPredicted RBP11.29□□□□□ -0.6
PGK1-201ENST00000373316 TBCCQ15814 346 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 NTRK3Q16288 839 aa11.29□□□□□ -0.6
PGK1-201ENST00000373316 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms