RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 GPC4O75487 556 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 PDE1BQ01064 536 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 SNX1Q13596 522 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 ARID5BQ14865 1188 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 KRT31Q15323 416 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 NFU1Q9UMS0 254 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 PLAAQ9Y263 795 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 GYS2P54840 703 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 KYAT1Q16773 422 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 SLC10A5Q5PT55 438 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 CYFIP1Q7L576 1253 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 PDLIM2Q96JY6 352 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 ZNF668Q96K58 619 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 POLLQ9UGP5 575 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 PVALEFA0A1B0GWK0 134 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 MAPK13O15264 365 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 DYNC1LI2O43237 492 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 EPHX2P34913 555 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 SLCO1A2P46721 670 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 SKA2Q8WVK7 121 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 PRR12Q9ULL5 1215 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 DIS3Q9Y2L1 958 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 CARSP49589 748 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 FSCBQ5H9T9 825 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 CYP4F22Q6NT55 531 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 PPP1R14BQ96C90 147 aa14.18□□□□□ -0.14
RAPGEF1-201ENST00000372189 ZNF609O15014 1411 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 MCF2LO15068 1137 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 MT-ND3P03897 115 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 MMP14P50281 582 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 TUFT1Q9NNX1 390 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 CCDC188H7C350 402 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 GGPS1O95749 300 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 C6orf222P0C671 652 aaPredicted RBP14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 ADCY1Q08828 1119 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 CHST13Q8NET6 341 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 GDAP1Q8TB36 358 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 C6orf203Q9P0P8 240 aaPredicted RBP14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 RASA1P20936 1047 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 YWHABP31946 246 aaKnown RBP14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 FCGRTP55899 365 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 CDC42EP1Q00587 391 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 TSGA10IPQ3SY00 556 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 C16orf87Q6PH81 154 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 PROM2Q8N271 834 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 CEP70Q8NHQ1 597 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 PARVBQ9HBI1 364 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 ZMYND8Q9ULU4 1186 aaPredicted RBP14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 CAPN1P07384 714 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 CLEC10AQ8IUN9 316 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 SCN4BQ8IWT1 228 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 NUDT12Q9BQG2 462 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 EFHD1Q9BUP0 239 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 CAPN11Q9UMQ6 739 aa14.17□□□□□ -0.14
RAPGEF1-201ENST00000372189 SMARCAD1Q9H4L7 1026 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 ZNF18P17022 549 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 TBC1D1Q86TI0 1168 aaPredicted RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 TRIM56Q9BRZ2 755 aaKnown RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 FGFR1OP2Q9NVK5 253 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 DPYSL4O14531 572 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 DCTN3O75935 186 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 SRGNP10124 158 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 SLC44A4Q53GD3 710 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 ST13P4Q8IZP2 240 aaPredicted RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 CALN1Q9BXU9 219 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 MTIF3Q9H2K0 278 aaKnown RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 CACYBPQ9HB71 228 aaKnown RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 ANO9A1A5B4 782 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 ACTN1P12814 892 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 KLRK1P26718 216 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 RFX5P48382 616 aaPredicted RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 PDCLQ13371 301 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 KNOP1Q1ED39 458 aaKnown RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 C1orf228Q6PIY5 440 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 TNS2Q63HR2 1409 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 CPP00450 1065 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 KRT4P19013 534 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 KCNJ6P48051 423 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 EFNA5P52803 228 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 STX1BP61266 288 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 CYP27A1Q02318 531 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 LBHD1Q9BQE6 289 aaPredicted RBP14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 AP1M1Q9BXS5 423 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 IQGAP1P46940 1657 aa14.16□□□□□ -0.14
RAPGEF1-201ENST00000372189 EXOC1LA0A1B0GW35 172 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 UBE2Q2LH0YL09 131 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 RARBP10826 455 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ZNF449Q6P9G9 518 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 STX12Q86Y82 276 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 RWDD3Q9Y3V2 267 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 ESRRAP11474 423 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 GGCXP38435 758 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 DYNLT1P63172 113 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 STK25O00506 426 aa14.15□□□□□ -0.14
RAPGEF1-201ENST00000372189 SAT1P21673 171 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms