RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 RNF149Q8NC42 400 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 ACRBPQ8NEB7 543 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 PPP1R13LQ8WUF5 828 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 CTAGE1Q96RT6 745 aa20.13■□□□□ 0.81
VEGFA-206ENST00000372077 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.13■□□□□ 0.813e-7■■■■□ 25.1
VEGFA-206ENST00000372077 SMIM35A0A1B0GVV1 85 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 CLIC2O15247 247 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 GJB1P08034 283 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 HSPA8P11142 646 aaKnown RBP20.12■□□□□ 0.81
VEGFA-206ENST00000372077 NFKBIZQ9BYH8 718 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 TAB2Q9NYJ8 693 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 PHLPP2Q6ZVD8 1323 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 A0A1B0GTH6 734 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 C17orf102A2RUQ5 167 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 K7ERI5 159 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 GNA14O95837 355 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 SRGAP2CP0DJJ0 459 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 CASP14P31944 242 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 EFNA5P52803 228 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 MARSP56192 900 aaKnown RBP20.12■□□□□ 0.81
VEGFA-206ENST00000372077 NBPF20Q3BBV1 942 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 RAD9BQ6WBX8 426 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 IFNLR1Q8IU57 520 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-206ENST00000372077 C7orf31Q8N865 590 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 ANKRD20A12PQ8NF67 263 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 CCDC113Q9H0I3 377 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 C2orf40Q9H1Z8 148 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 FRMPD3Q5JV73 1810 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 GNAT1P11488 350 aa20.12■□□□□ 0.81
VEGFA-206ENST00000372077 TSEN34Q9BSV6 310 aaKnown RBP20.12■□□□□ 0.81
VEGFA-206ENST00000372077 PIGRP01833 764 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 COPB1P53618 953 aaKnown RBP20.11■□□□□ 0.81
VEGFA-206ENST00000372077 PTENP60484 403 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 NR1I3Q14994 352 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 SESTD1Q86VW0 696 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 AKT3Q9Y243 479 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 CABYRO75952 493 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 ZBTB8OSQ8IWT0 167 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 L2HGDHQ9H9P8 463 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 GTF2IRD1Q9UHL9 959 aa20.11■□□□□ 0.81
VEGFA-206ENST00000372077 ANKRD63C9JTQ0 380 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 TREHO43280 583 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 CYP2C9P11712 490 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 STRN3Q13033 797 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 SLC39A4Q6P5W5 647 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 NLRP4Q96MN2 994 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 UNC93B1Q9H1C4 597 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 TISP43B9A030 160 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 ACLYP53396 1101 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 ZNF200P98182 395 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-206ENST00000372077 TUBGCP2Q9BSJ2 902 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 IFT122Q9HBG6 1241 aa20.1■□□□□ 0.81
VEGFA-206ENST00000372077 PAK6Q9NQU5 681 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-206ENST00000372077 GRIN2DO15399 1336 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 SLC16A3O15427 465 aaKnown RBP20.09■□□□□ 0.81
VEGFA-206ENST00000372077 VTNP04004 478 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 FXR1P51114 621 aaKnown RBP eCLIP20.09■□□□□ 0.81
VEGFA-206ENST00000372077 SLC9C1Q4G0N8 1177 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 RUFY4Q6ZNE9 571 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 TRIM10Q9UDY6 481 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 AKAP3O75969 853 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 MYCNP04198 464 aaPredicted RBP20.09■□□□□ 0.81
VEGFA-206ENST00000372077 ADSSP30520 456 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 GPC3P51654 580 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 CDC42EP1Q00587 391 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 CTU1Q7Z7A3 348 aaKnown RBP20.09■□□□□ 0.81
VEGFA-206ENST00000372077 MKNK1Q9BUB5 465 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 FZD8Q9H461 694 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 STYXL1Q9Y6J8 313 aa20.09■□□□□ 0.81
VEGFA-206ENST00000372077 EDN1P05305 212 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 MTIF2P46199 727 aaKnown RBP20.08■□□□□ 0.81
VEGFA-206ENST00000372077 CASP4P49662 377 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 FILIP1LQ4L180 1135 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 FRMD5Q7Z6J6 570 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 ZNF410Q86VK4 478 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 PPFIBP1Q86W92 1011 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 ARRDC4Q8NCT1 418 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 CBWD1Q9BRT8 395 aa20.08■□□□□ 0.81
VEGFA-206ENST00000372077 A0A087WZ62 844 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 ARHGAP6O43182 974 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 PHKA2P46019 1235 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 BORCS6Q96GS4 357 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 FDXACB1Q9BRP7 624 aaPredicted RBP20.08■□□□□ 0.8
VEGFA-206ENST00000372077 FHOD1Q9Y613 1164 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 HTTP42858 3142 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 GARTP22102 1010 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 MBTD1Q05BQ5 628 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 CCDC40Q4G0X9 1142 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 TRIM59Q8IWR1 403 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 ZNF668Q96K58 619 aaPredicted RBP20.08■□□□□ 0.8
VEGFA-206ENST00000372077 ADAMTS10Q9H324 1103 aa20.08■□□□□ 0.8
VEGFA-206ENST00000372077 HNRNPDLO14979 420 aaKnown RBP20.07■□□□□ 0.8
VEGFA-206ENST00000372077 PNMA6AP0CW24 399 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-206ENST00000372077 PSMC2P35998 433 aaKnown RBP20.07■□□□□ 0.8
VEGFA-206ENST00000372077 NLRP11P59045 1033 aaKnown RBP20.07■□□□□ 0.8
VEGFA-206ENST00000372077 PPP2R3AQ06190 1150 aa20.07■□□□□ 0.8
VEGFA-206ENST00000372077 MTFR1Q15390 333 aa20.07■□□□□ 0.8
VEGFA-206ENST00000372077 MAPK6Q16659 721 aa20.07■□□□□ 0.8
VEGFA-206ENST00000372077 FAM187BQ17R55 369 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms