RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MTRF1O75570 445 aaKnown RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 GPC5P78333 572 aa16.13■□□□□ 0.17
COL5A1-201ENST00000371817 H2AFY2Q9P0M6 372 aaPredicted RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 CDK13Q14004 1512 aaKnown RBP16.13■□□□□ 0.17
COL5A1-201ENST00000371817 E5RI56 91 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 BCL10O95999 233 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 COG2Q14746 738 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 C11orf88Q6PI97 169 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 A0A0D9SFI3 127 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 TK2O00142 265 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 SETD3Q86TU7 594 aaPredicted RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 GPKOWQ92917 476 aaPredicted RBP eCLIP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 NDUFB9Q9Y6M9 179 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 HIBADHP31937 336 aaKnown RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 MXI1P50539 228 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 PCP11498 1178 aaKnown RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 CDC37Q16543 378 aaPredicted RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 LPCAT2Q7L5N7 544 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 STKLD1Q8NE28 680 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 LPIN2Q92539 896 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 AIM2O14862 343 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 EIF3DO15371 548 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 GUCY1B2O75343 617 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 ITIH4Q14624 930 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 STK39Q9UEW8 545 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 CUL7Q14999 1698 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 NESP48681 1621 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 AHCYL1O43865 530 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 FOSL2P15408 326 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 TARSP26639 723 aaKnown RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 ZFRQ96KR1 1074 aaKnown RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 DDX47Q9H0S4 455 aaKnown RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 SRPRBQ9Y5M8 271 aaKnown RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 SCTRP47872 440 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 SPOUT1Q5T280 376 aaKnown RBP16.12■□□□□ 0.17
COL5A1-201ENST00000371817 RCSD1Q6JBY9 416 aa16.12■□□□□ 0.17
COL5A1-201ENST00000371817 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 CCNE1P24864 410 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 PUDPQ08623 228 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 PLEKHA8Q96JA3 519 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 PPCSQ9HAB8 311 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 RABGEF1Q9UJ41 708 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 ADAM30Q9UKF2 790 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 HEY1Q9Y5J3 304 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 NQO1P15559 274 aaKnown RBP16.11■□□□□ 0.17
COL5A1-201ENST00000371817 CYP4A11Q02928 519 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 MROH5Q6ZUA9 1318 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 IKBIPQ70UQ0 350 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 DTNAQ9Y4J8 743 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 LGALS16A8MUM7 142 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 B2RBV5 119 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 CLIC2O15247 247 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
COL5A1-201ENST00000371817 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 CDO1Q16878 200 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 FAM47AQ5JRC9 791 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 RNF135Q8IUD6 432 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 VPS50Q96JG6 964 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 REXO4Q9GZR2 422 aaKnown RBP16.11■□□□□ 0.17
COL5A1-201ENST00000371817 LRRC4Q9HBW1 653 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 MAD2L2Q9UI95 211 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 IVNS1ABPQ9Y6Y0 642 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
COL5A1-201ENST00000371817 RALBP11234 206 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 NFKBIAP25963 317 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 TALDO1P37837 337 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 JDP2Q8WYK2 163 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 RNF26Q9BY78 433 aaPredicted RBP16.11■□□□□ 0.17
COL5A1-201ENST00000371817 CD209Q9NNX6 404 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 LINC00854A0A1B0GVQ3 168 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 PDE9AO76083 593 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 TRAPPC9Q96Q05 1148 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 UVRAGQ9P2Y5 699 aa16.11■□□□□ 0.17
COL5A1-201ENST00000371817 SAC3D1A6NKF1 404 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 PROM2Q8N271 834 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 SLC10A4Q96EP9 437 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 CDYLQ9Y232 598 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 NCF4Q15080 339 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 APPL1Q9UKG1 709 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 RNF123Q5XPI4 1314 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 LSM1O15116 133 aaKnown RBP16.1■□□□□ 0.17
COL5A1-201ENST00000371817 PRKG1Q13976 671 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 SYDE1Q6ZW31 735 aaPredicted RBP16.1■□□□□ 0.17
COL5A1-201ENST00000371817 SELENONQ9NZV5 590 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 NOS1P29475 1434 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 PPIP5K1Q6PFW1 1433 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 PLCH2O75038 1416 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 FOXO3O43524 673 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 TCN1P20061 433 aaPredicted RBP16.1■□□□□ 0.17
COL5A1-201ENST00000371817 RECQLP46063 649 aaPredicted RBP16.1■□□□□ 0.17
COL5A1-201ENST00000371817 PABPC4Q13310 644 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL5A1-201ENST00000371817 TAB1Q15750 504 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 BBS7Q8IWZ6 715 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 ZNF507Q8TCN5 953 aa16.1■□□□□ 0.17
COL5A1-201ENST00000371817 FAM162AQ96A26 154 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms