RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 FAM118BQ9BPY3 351 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 SPOPO43791 374 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 TUBBP07437 444 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 LIG4P49917 911 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 HIRAP54198 1017 aaPredicted RBP12.69□□□□□ -0.38
PDE6C-201ENST00000371447 KRT76Q01546 638 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 MTMR14Q8NCE2 650 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 TMEM161BQ8NDZ6 487 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 GOLGA5Q8TBA6 731 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 ZIM3Q96PE6 472 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 PCDHB18PQ96TA0 734 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 SLC9A2Q9UBY0 812 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 MYH11P35749 1972 aa12.69□□□□□ -0.38
PDE6C-201ENST00000371447 SRGAP2CP0DJJ0 459 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 CDR1P51861 262 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ZBTB41Q5SVQ8 909 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 SCARA3Q6AZY7 606 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 NOP9Q86U38 636 aaKnown RBP12.68□□□□□ -0.38
PDE6C-201ENST00000371447 AENQ8WTP8 325 aaKnown RBP12.68□□□□□ -0.38
PDE6C-201ENST00000371447 AS3MTQ9HBK9 375 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ZNF214Q9UL59 606 aaPredicted RBP12.68□□□□□ -0.38
PDE6C-201ENST00000371447 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
PDE6C-201ENST00000371447 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
PDE6C-201ENST00000371447 PRLRP16471 622 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 FLT3P36888 993 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 EPHB4P54760 987 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 TGFB2P61812 414 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 C1orf220Q5T0J3 134 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 OTUD6AQ7L8S5 288 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 LRRC57Q8N9N7 239 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 FAM76AQ8TAV0 307 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 LMBR1Q8WVP7 490 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 CPA5Q8WXQ8 436 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 FNBP1Q96RU3 617 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ZNF408Q9H9D4 720 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ELP3Q9H9T3 547 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 CYP39A1Q9NYL5 469 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 PPP1R37O75864 691 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 SNX1Q13596 522 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 CEP85LQ5SZL2 805 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 NT5DC3Q86UY8 548 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 PPP1R13LQ8WUF5 828 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ALG3Q92685 438 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ZNF653Q96CK0 615 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 IFT74Q96LB3 600 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 KREMEN1Q96MU8 473 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 MKNK1Q9BUB5 465 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 TARS2Q9BW92 718 aaKnown RBP12.68□□□□□ -0.38
PDE6C-201ENST00000371447 TRIM7Q9C029 511 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 ALG6Q9Y672 507 aa12.68□□□□□ -0.38
PDE6C-201ENST00000371447 SLC26A4O43511 780 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 PRKCIP41743 596 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 KCNJ1P48048 391 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 VPS41P49754 854 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 JAK3P52333 1124 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 FOXR2Q6PJQ5 311 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 SV2AQ7L0J3 742 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 C4orf19Q8IY42 314 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 ATP6V0A1Q93050 837 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 ACAD9Q9H845 621 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 DNAJC17Q9NVM6 304 aaKnown RBP12.67□□□□□ -0.38
PDE6C-201ENST00000371447 RPTORQ8N122 1335 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 TLDC2A0PJX2 215 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 GJB6O95452 261 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 PSAPP07602 524 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 GJB1P08034 283 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 DSG3P32926 999 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 PAK2Q13177 524 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 DRP2Q13474 957 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 LRRC71Q8N4P6 559 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 LMO3Q8TAP4 145 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 RFFLQ8WZ73 363 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 CLMNQ96JQ2 1002 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
PDE6C-201ENST00000371447 KCND2Q9NZV8 630 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 USTQ9Y2C2 406 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 PFASO15067 1338 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 PLA2G6O60733 806 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 WNT7BP56706 349 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
PDE6C-201ENST00000371447 IGBP1P78318 339 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 PDCLQ13371 301 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 LY6KQ17RY6 165 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 ODF2Q5BJF6 829 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 TMEM130Q8N3G9 435 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 EXOC4Q96A65 974 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDE6C-201ENST00000371447 NEUROG2Q9H2A3 272 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms