RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 RHOBTB3O94955 611 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 ALDH5A1P51649 535 aaPredicted RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 DMP1Q13316 513 aaPredicted RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 AGAP11Q8TF27 550 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 CCDC90BQ9GZT6 254 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 DCLRE1BQ9H816 532 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 ARHGEF10LQ9HCE6 1279 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 SENP1Q9P0U3 644 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 CLDN3O15551 220 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 INPP1P49441 399 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 YWHAEP62258 255 aaKnown RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 SMAD1Q15797 465 aaKnown RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 COL23A1Q86Y22 540 aaPredicted RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 AGR3Q8TD06 166 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 NSL1Q96IY1 281 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 PLAGL2Q9UPG8 496 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 GINS2Q9Y248 185 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 INPP5FQ9Y2H2 1132 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 SYNJ2BP-COX16A0A087WUM0 186 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 SORBS3O60504 671 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 HOXA7P31268 230 aaPredicted RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 TLK2Q86UE8 772 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 ROPN1BQ9BZX4 212 aaPredicted RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 ROPN1Q9HAT0 212 aaPredicted RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 COX16Q9P0S2 106 aa13.47□□□□□ -0.25
GPC4-201ENST00000370828 TMA7Q9Y2S6 64 aaKnown RBP13.47□□□□□ -0.25
GPC4-201ENST00000370828 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 TRIM49P0CI25 452 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 TRIM49CP0CI26 452 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 DNAL1Q4LDG9 190 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 PASD1Q8IV76 773 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 DNAAF3Q8N9W5 541 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 ZNF507Q8TCN5 953 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 OMA1Q96E52 524 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 ADAM22Q9P0K1 906 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 STRIP2Q9ULQ0 834 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 POTECB2RU33 542 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 H7C1W4 665 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 TTLL1O95922 423 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 HSPA8P11142 646 aaKnown RBP13.46□□□□□ -0.25
GPC4-201ENST00000370828 ZNF18P17022 549 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 BTDP43251 543 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 OCRLQ01968 901 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 DSG1Q02413 1049 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 TBX2Q13207 712 aaPredicted RBP13.46□□□□□ -0.25
GPC4-201ENST00000370828 CTTNQ14247 550 aaKnown RBP13.46□□□□□ -0.25
GPC4-201ENST00000370828 TRIM60Q495X7 471 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 ACAP3Q96P50 834 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 VPS11Q9H270 941 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 C2CD2Q9Y426 696 aa13.46□□□□□ -0.25
GPC4-201ENST00000370828 ATP7AQ04656 1500 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 GGPS1O95749 300 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 PRLRP16471 622 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 KNOP1Q1ED39 458 aaKnown RBP13.46□□□□□ -0.26
GPC4-201ENST00000370828 CCDC125Q86Z20 511 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 C11orf70Q9BRQ4 267 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 HPS5Q9UPZ3 1129 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 BCS1LQ9Y276 419 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 GMEB1Q9Y692 573 aa13.46□□□□□ -0.26
GPC4-201ENST00000370828 A0A1W2PQJ5 194 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 CYP2D6P10635 497 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 SOX5P35711 763 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 RAP1GDS1P52306 607 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 LVRNQ6Q4G3 990 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 CCT7Q99832 543 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 SH3GLB2Q9NR46 395 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 TMEM260Q9NX78 707 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 PHTF1Q9UMS5 762 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 ATP11BQ9Y2G3 1177 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 CPDO75976 1380 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 KRT8P05787 483 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 MYBL2P10244 700 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 MFSD14BQ5SR56 506 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
GPC4-201ENST00000370828 MXD3Q9BW11 206 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 ANGPTL3Q9Y5C1 460 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 ORC6Q9Y5N6 252 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 ARHGEF40Q8TER5 1519 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 ATP7BP35670 1465 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
GPC4-201ENST00000370828 ZBED1O96006 694 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 CAPN1P07384 714 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 CD58P19256 250 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 ATP4AP20648 1035 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
GPC4-201ENST00000370828 ARSEP51690 589 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 CCNYQ8ND76 341 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 KCNB2Q92953 911 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 FAM118BQ9BPY3 351 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 A0A087X0T9 212 aa13.45□□□□□ -0.26
GPC4-201ENST00000370828 A6NJR5 290 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms