RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 PALB2Q86YC2 1186 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 DEFB124Q8NES8 71 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 SPAG17Q6Q759 2223 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 CAVIN2O95810 425 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 NTRK1P04629 796 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 CCDC192P0DO97 292 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
TUBE1-201ENST00000368657 EIF4BP23588 611 aaKnown RBP11.81□□□□□ -0.52
TUBE1-201ENST00000368657 GLUD2P49448 558 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 MLLT6P55198 1093 aaPredicted RBP11.81□□□□□ -0.52
TUBE1-201ENST00000368657 ALX1Q15699 326 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 ZNF484Q5JVG2 852 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 TCEAL6Q6IPX3 200 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 ZNF280BQ86YH2 543 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 GPR65Q8IYL9 337 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 IRF7Q92985 503 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 TCEAL3Q969E4 200 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 MTMR8Q96EF0 704 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 TMEM175Q9BSA9 504 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 HERC2P3Q9BVR0 1158 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 TRAIPQ9BWF2 469 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 CLMPQ9H6B4 373 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 BRD9Q9H8M2 597 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 CHST12Q9NRB3 414 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.81□□□□□ -0.52
TUBE1-201ENST00000368657 ECHDC1Q9NTX5 307 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
TUBE1-201ENST00000368657 F5P12259 2224 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 COL1A2P08123 1366 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 HECTD1Q9ULT8 2610 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 ATXN7O15265 892 aaPredicted RBP11.8□□□□□ -0.52
TUBE1-201ENST00000368657 PPP1R11O60927 126 aaPredicted RBP11.8□□□□□ -0.52
TUBE1-201ENST00000368657 HMMRO75330 724 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 OFD1O75665 1012 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 ITPRIPQ8IWB1 547 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 ELSPBP1Q96BH3 223 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 PPP1R16BQ96T49 567 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 PLA2G2FQ9BZM2 168 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 GDE1Q9NZC3 331 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 FNIP2Q9P278 1114 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 KANSL3Q9P2N6 904 aa11.8□□□□□ -0.52
TUBE1-201ENST00000368657 SHROOM3Q8TF72 1996 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 LNP1A1A4G5 178 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 CDX4O14627 284 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-201ENST00000368657 NRP1O14786 923 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 KHNYNO15037 678 aaKnown RBP11.79□□□□□ -0.52
TUBE1-201ENST00000368657 XYLBO75191 536 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 RHOBTB1O94844 696 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 PHKA2P46019 1235 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 NTHL1P78549 312 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 SIM1P81133 766 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-201ENST00000368657 DSG1Q02413 1049 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 DGKKQ5KSL6 1271 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 ZMYM1Q5SVZ6 1142 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 TAS1R1Q7RTX1 841 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
TUBE1-201ENST00000368657 CHCHD4Q8N4Q1 142 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 ITFG1Q8TB96 612 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 FAM193BQ96PV7 902 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-201ENST00000368657 TRMT61BQ9BVS5 477 aaKnown RBP11.79□□□□□ -0.52
TUBE1-201ENST00000368657 JPH1Q9HDC5 661 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-201ENST00000368657 SLC9A2Q9UBY0 812 aa11.79□□□□□ -0.52
TUBE1-201ENST00000368657 PCNX2A6NKB5 2137 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 EVPLQ92817 2033 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 BCLAF3A2AJT9 711 aaKnown RBP11.78□□□□□ -0.52
TUBE1-201ENST00000368657 FOXP2O15409 715 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 VTNP04004 478 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 HOXB1P14653 301 aaPredicted RBP11.78□□□□□ -0.52
TUBE1-201ENST00000368657 HOXA9P31269 272 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 NT5C2P49902 561 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 NLRP11P59045 1033 aaKnown RBP11.78□□□□□ -0.52
TUBE1-201ENST00000368657 CREMQ03060 361 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 SRSF1Q07955 248 aaKnown RBP eCLIP11.78□□□□□ -0.52
TUBE1-201ENST00000368657 ZNF423Q2M1K9 1284 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 PLK5Q496M5 336 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 MFSD6Q6ZSS7 791 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 NPAS3Q8IXF0 933 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 ZNF843Q8N446 348 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 URGCPQ8TCY9 931 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 MSANTD3Q96H12 275 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 MBOAT7Q96N66 472 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 RYDENQ9NUL5 291 aaKnown RBP11.78□□□□□ -0.52
TUBE1-201ENST00000368657 INPP5FQ9Y2H2 1132 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 RAXQ9Y2V3 346 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 PIAS3Q9Y6X2 628 aa11.78□□□□□ -0.52
TUBE1-201ENST00000368657 KLRF2D3W0D1 207 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 ZNF623O75123 536 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 DDHD2O94830 711 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 CREB5Q02930 508 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 KCNC4Q03721 635 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 MTMR1Q13613 665 aa11.77□□□□□ -0.53
TUBE1-201ENST00000368657 ELF2Q15723 593 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms