RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TAF1CQ15572 869 aaPredicted RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 LMBRD2Q68DH5 695 aaPredicted RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 ERGIC2Q96RQ1 377 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 BUB1O43683 1085 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 STBD1O95210 358 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 EPB41P11171 864 aaKnown RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 XRCC5P13010 732 aaKnown RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 GGCXP38435 758 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 DMP1Q13316 513 aaPredicted RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 RAPGEF1Q13905 1077 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 MAP9Q49MG5 647 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 OTUD6AQ7L8S5 288 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 GPR142Q7Z601 462 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 METTL13Q8N6R0 699 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 TTYH3Q9C0H2 523 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 ODF2LQ9ULJ1 636 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 PDXKO00764 312 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 SRGAP2CP0DJJ0 459 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 ZNF131P52739 623 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 EMC2Q15006 297 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 COBLL1Q53SF7 1204 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 XRRA1Q6P2D8 792 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 TRIM59Q8IWR1 403 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 SMARCAL1Q9NZC9 954 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 ARHGAP20Q9P2F6 1191 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 ZNF263O14978 683 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 MAFGO15525 162 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 OATP04181 439 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 TUBBP07437 444 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 CYP2B6P20813 491 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 SAMD3Q8N6K7 520 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 ALS2CR12Q96Q35 445 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 TSGA10Q9BZW7 698 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 MROH8Q9H579 483 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 AZI2Q9H6S1 392 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
TPM3-212ENST00000368533 AJAP1Q9UKB5 411 aaPredicted RBP11.54□□□□□ -0.56
TPM3-212ENST00000368533 TRAF3IP3Q9Y228 551 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 GINS2Q9Y248 185 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 WDR81Q562E7 1941 aa11.54□□□□□ -0.56
TPM3-212ENST00000368533 PDE2AO00408 941 aaPredicted RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 EDNRBP24530 442 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 IRAK1P51617 712 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 GFPT1Q06210 699 aaPredicted RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 CCL14Q16627 93 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 IQCEQ6IPM2 695 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CBWD2Q8IUF1 395 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 TRIM58Q8NG06 486 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 NPLOC4Q8TAT6 608 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 ZBTB45Q96K62 511 aaPredicted RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 TOPORSQ9NS56 1045 aaPredicted RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 BCCIPQ9P287 314 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM3-212ENST00000368533 ANKFY1Q9P2R3 1169 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 PLAGL2Q9UPG8 496 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CAPN6Q9Y6Q1 641 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 DNAJC25-GNG10A0A024R161 153 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 TTLL13PA6NNM8 815 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 HNRNPDLO14979 420 aaKnown RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 NCK2O43639 380 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 GCLMP48507 274 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CCNA1P78396 465 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CBWD6Q4V339 395 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CBWD3Q5JTY5 395 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CBWD5Q5RIA9 395 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 PAPD7Q5XG87 772 aaKnown RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 AFG1LQ8WV93 481 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 ATP6V0A4Q9HBG4 840 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 DLATP10515 647 aaKnown RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 MCM3P25205 808 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 RNASE9P60153 205 aaKnown RBP11.53□□□□□ -0.56
TPM3-212ENST00000368533 NEDD9Q14511 834 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 XKR3Q5GH77 459 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 NFRKBQ6P4R8 1299 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 METTL7BQ6UX53 244 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM3-212ENST00000368533 SAPCD2Q86UD0 394 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 TMEM161BQ8NDZ6 487 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 COG1Q8WTW3 980 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 SEPT1Q8WYJ6 367 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 MIEF2Q96C03 454 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 CEP63Q96MT8 703 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 RNPEPQ9H4A4 650 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 FRMD4BQ9Y2L6 1034 aa11.53□□□□□ -0.56
TPM3-212ENST00000368533 NFASCO94856 1347 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 ADCY6O43306 1168 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 RPL13P26373 211 aaKnown RBP11.52□□□□□ -0.56
TPM3-212ENST00000368533 CLCN3P51790 818 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 SLC7A5Q01650 507 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 CEP57Q86XR8 500 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 RASAL3Q86YV0 1011 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 SLC7A3Q8WY07 619 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 SLC35C1Q96A29 364 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.56
TPM3-212ENST00000368533 GPR20Q99678 358 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms