RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 EIF2AQ9BY44 585 aaKnown RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 MTIF3Q9H2K0 278 aaKnown RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 ST6GALNAC4Q9H4F1 302 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 PDZD7Q9H5P4 517 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 RGS18Q9NS28 235 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 RMND1Q9NWS8 449 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 MAN1B1Q9UKM7 699 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 SLC4A7Q9Y6M7 1214 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 PDE4DIPQ5VU43 2346 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 A0A1B0GUA9 196 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 TISP43B9A030 160 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 C9IYK1 514 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 ANKRD63C9JTQ0 380 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 HNRNPDLO14979 420 aaKnown RBP15.24■□□□□ 0.03
TPM3-211ENST00000368531 TNRC18O15417 2968 aaPredicted RBP15.24■□□□□ 0.03
TPM3-211ENST00000368531 EFCAB14O75071 495 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 AMHP03971 560 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 BMP8BP34820 402 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 SARSP49591 514 aaKnown RBP15.24■□□□□ 0.03
TPM3-211ENST00000368531 ALCAMQ13740 583 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 UBXN11Q5T124 520 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 SLC24A5Q71RS6 500 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 KIAA0895Q8NCT3 520 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 HVCN1Q96D96 273 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 GSDMAQ96QA5 445 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 ADPGKQ9BRR6 497 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 APOL6Q9BWW8 343 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 STRA6Q9BX79 667 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 TRIM6Q9C030 488 aaPredicted RBP15.24■□□□□ 0.03
TPM3-211ENST00000368531 C1orf112Q9NSG2 853 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 FAM105AQ9NUU6 356 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 ANKFY1Q9P2R3 1169 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 LRFN2Q9ULH4 789 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 PCDHB2Q9Y5E7 798 aa15.24■□□□□ 0.03
TPM3-211ENST00000368531 GBF1Q92538 1859 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 TTC3P53804 2025 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 PTMSP20962 102 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 ABCD1P33897 745 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 NFKBIBQ15653 356 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 ZNF568Q3ZCX4 644 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 SLC27A1Q6PCB7 646 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 EPM2AIP1Q7L775 607 aaPredicted RBP15.23■□□□□ 0.03
TPM3-211ENST00000368531 ECHDC2Q86YB7 292 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 MAP4K3Q8IVH8 894 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 ZNF507Q8TCN5 953 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 SCFD1Q8WVM8 642 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 LPPQ93052 612 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 KIAA1468Q9P260 1216 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 COLQQ9Y215 455 aaPredicted RBP15.23■□□□□ 0.03
TPM3-211ENST00000368531 TNFSF13BQ9Y275 285 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 HES2Q9Y543 173 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 PCDHB7Q9Y5E2 793 aa15.23■□□□□ 0.03
TPM3-211ENST00000368531 GRXCR1A8MXD5 290 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 TULP1O00294 542 aaPredicted RBP15.22■□□□□ 0.03
TPM3-211ENST00000368531 EIF3DO15371 548 aaKnown RBP eCLIP15.22■□□□□ 0.03
TPM3-211ENST00000368531 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
TPM3-211ENST00000368531 SCP2P22307 547 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 HOXD13P35453 343 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 OSTNP61366 133 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 ZNF658Q5TYW1 1059 aaPredicted RBP15.22■□□□□ 0.03
TPM3-211ENST00000368531 PRPF38BQ5VTL8 546 aaKnown RBP15.22■□□□□ 0.03
TPM3-211ENST00000368531 CAVIN1Q6NZI2 390 aaKnown RBP15.22■□□□□ 0.03
TPM3-211ENST00000368531 SLC39A4Q6P5W5 647 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 MPZL3Q6UWV2 235 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 ZPBP2Q6X784 338 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 SPATA20Q8TB22 786 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
TPM3-211ENST00000368531 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 ZBED2Q9BTP6 218 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 IPPQ9Y573 584 aa15.22■□□□□ 0.03
TPM3-211ENST00000368531 A0A0U1RQF3 1178 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 MEIS3P2A8K0S8 358 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 CLDN3O15551 220 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 TOM1L1O75674 476 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 STAG3L1P0CL83 205 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 SKIP12755 728 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 GATMP50440 423 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 RABGGTBP53611 331 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 FAM189BP81408 668 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 SEZ6Q53EL9 994 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 CCDC183Q5T5S1 534 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 RASIP1Q5U651 963 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 FAM109BQ6ICB4 259 aaPredicted RBP15.21■□□□□ 0.03
TPM3-211ENST00000368531 THNSL1Q8IYQ7 743 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 SMG8Q8ND04 991 aaKnown RBP15.21■□□□□ 0.03
TPM3-211ENST00000368531 KCNN1Q92952 543 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 HAPLN2Q9GZV7 340 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 CDT1Q9H211 546 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 NXF3Q9H4D5 531 aaKnown RBP15.21■□□□□ 0.03
TPM3-211ENST00000368531 PCIF1Q9H4Z3 704 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 TMEM206Q9H813 350 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 PTPRHQ9HD43 1115 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 TMEM63CQ9P1W3 806 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 PARP2Q9UGN5 583 aa15.21■□□□□ 0.03
TPM3-211ENST00000368531 UBE4BO95155 1302 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 TRIP11Q15643 1979 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 CLIC2O15247 247 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms