RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 AGMOQ6ZNB7 445 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 ARNTL2Q8WYA1 636 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 CCDC51Q96ER9 411 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 A0A1W2PQ27 194 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 A0A1W2PQ64 194 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 A0A1W2PQD8 194 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 K7ENM7 598 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 ACTN4O43707 911 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 TRAK2O60296 914 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 NMT1P30419 496 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 SMTNP53814 917 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 ERVK-21P61565 698 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 TMEM132AQ24JP5 1023 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 HAUS6Q7Z4H7 955 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 TRIM9Q9C026 710 aa16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 NXF3Q9H4D5 531 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
SMPDL3A-201ENST00000368440 FAM237AA0A1B0GTK4 181 aa16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 N4BP3O15049 544 aa16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 SKIP12755 728 aa16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 IDEP14735 1019 aa16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 ATF7IP2Q5U623 682 aa16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 MYLIPQ8WY64 445 aa16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 CDX2Q99626 313 aaPredicted RBP16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 TARS2Q9BW92 718 aaKnown RBP16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 TMEM117Q9H0C3 514 aa16.58■□□□□ 0.24
SMPDL3A-201ENST00000368440 FRMD3A2A2Y4 597 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 AFMP43652 599 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 AFF1P51825 1210 aaKnown RBP16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 LRRC55Q6ZSA7 311 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 FAM178BQ8IXR5 827 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 MRPS27Q92552 414 aaKnown RBP16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 ACO2Q99798 780 aaKnown RBP16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 APOL6Q9BWW8 343 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 FGFBP2Q9BYJ0 223 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 TRIM6Q9C030 488 aaPredicted RBP16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 BLZF1Q9H2G9 400 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 TBC1D7Q9P0N9 293 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 ATG2AQ2TAZ0 1938 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 PLXNA4Q9HCM2 1894 aa16.57■□□□□ 0.24
SMPDL3A-201ENST00000368440 HOXA2O43364 376 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 MCM4P33991 863 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZC2HC1CQ53FD0 456 aaPredicted RBP16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 TMEM192Q8IY95 271 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 GDPD5Q8WTR4 605 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 PGBD4Q96DM1 585 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 CWH43Q9H720 699 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 TYW1Q9NV66 732 aaKnown RBP16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 PANK4Q9NVE7 773 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 TDRD15B5MCY1 1934 aaKnown RBP16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 ABLIM1O14639 778 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 OFD1O75665 1012 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 SLFN14P0C7P3 912 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 ITGA4P13612 1032 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 AKAP5P24588 427 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 SYKP43405 635 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 ASIC1P78348 528 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 STRN3Q13033 797 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 ADGRE1Q14246 886 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 ZBTB45Q96K62 511 aaPredicted RBP16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 C7orf25Q9BPX7 421 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 RSAD1Q9HA92 442 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 PTPRHQ9HD43 1115 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 KCNG1Q9UIX4 513 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 INPP5FQ9Y2H2 1132 aa16.56■□□□□ 0.24
SMPDL3A-201ENST00000368440 GAP43P17677 238 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 CTNNB1P35222 781 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 CASP5P51878 434 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 COASYQ13057 564 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 CUL4BQ13620 913 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 HERC4Q5GLZ8 1057 aaPredicted RBP16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 CEP57L1Q8IYX8 460 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 CEP120Q8N960 986 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 CNNM3Q8NE01 707 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 KCNN1Q92952 543 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 HPS3Q969F9 1004 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 PYM1Q9BRP8 204 aaKnown RBP16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 CDT1Q9H211 546 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 IKZF4Q9H2S9 585 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 TBX20Q9UMR3 447 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 EYSQ5T1H1 3165 aa16.55■□□□□ 0.24
SMPDL3A-201ENST00000368440 H0YCG3 227 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 LPXNO60711 386 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 PROZP22891 400 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 MLH1P40692 756 aa16.54■□□□□ 0.24
SMPDL3A-201ENST00000368440 GTF2BQ00403 316 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 517.4 ms