RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
CD48-202ENST00000368046 CCDC39Q9UFE4 941 aa10.88□□□□□ -0.67
CD48-202ENST00000368046 COG5Q9UP83 839 aa10.88□□□□□ -0.67
CD48-202ENST00000368046 CARNS1A5YM72 827 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 CCDC169A6NNP5 214 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 MEIS3P2A8K0S8 358 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 B4GALT5O43286 388 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 FGF18O76093 207 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 ITGB1P05556 798 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 NPTX2P47972 431 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 NASPP49321 788 aaPredicted RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 ALDH7A1P49419 539 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 PEX3P56589 373 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 PLCB3Q01970 1234 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 UBE3AQ05086 875 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 MAPK7Q13164 816 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 PRPF4BQ13523 1007 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 CAMK1Q14012 370 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 KARSQ15046 597 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 SKIV2LQ15477 1246 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 ARSHQ5FYA8 562 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 NOMO2Q5JPE7 1267 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 SPECC1Q5M775 1068 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 COLGALT1Q8NBJ5 622 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 LINC00301Q8NCQ3 95 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 SMG8Q8ND04 991 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 POF1BQ8WVV4 589 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 ATXN2LQ8WWM7 1075 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 MFRPQ9BY79 579 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 TRIM6Q9C030 488 aaPredicted RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 TMEM134Q9H6X4 195 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 RSAD1Q9HA92 442 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 PRDM6Q9NQX0 595 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 BLOC1S4Q9NUP1 217 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 PUF60Q9UHX1 559 aaKnown RBP10.87□□□□□ -0.67
CD48-202ENST00000368046 IPPQ9Y573 584 aa10.87□□□□□ -0.67
CD48-202ENST00000368046 CNTNAP2Q9UHC6 1331 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 TRANK1O15050 2925 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.86□□□□□ -0.67
CD48-202ENST00000368046 SPTLC2O15270 562 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 PPP6R2O75170 966 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 F13A1P00488 732 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 ALDH2P05091 517 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 PRKCBP05771 671 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 PLS3P13797 630 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 SMTNP53814 917 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 KRT17Q04695 432 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 DHX8Q14562 1220 aaKnown RBP10.86□□□□□ -0.67
CD48-202ENST00000368046 STK38Q15208 465 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 TIGD5Q53EQ6 642 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
CD48-202ENST00000368046 RRAGBQ5VZM2 374 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 USP49Q70CQ1 688 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 CDR2LQ86X02 465 aaPredicted RBP10.86□□□□□ -0.67
CD48-202ENST00000368046 THNSL1Q8IYQ7 743 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 HACE1Q8IYU2 909 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 RASSF8Q8NHQ8 419 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 URGCPQ8TCY9 931 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 MICAL1Q8TDZ2 1067 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 SPIRE2Q8WWL2 714 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
CD48-202ENST00000368046 HLA-CQ95604 372 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 CLIC6Q96NY7 704 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 CCDC113Q9H0I3 377 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 NSUN3Q9H649 340 aaKnown RBP10.86□□□□□ -0.67
CD48-202ENST00000368046 KMT5AQ9NQR1 393 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 SPG21Q9NZD8 308 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 LARSQ9P2J5 1176 aaKnown RBP10.86□□□□□ -0.67
CD48-202ENST00000368046 LZTS1Q9Y250 596 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 GIT1Q9Y2X7 761 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 LOXHD1Q8IVV2 1947 aa10.86□□□□□ -0.67
CD48-202ENST00000368046 PHLPP2Q6ZVD8 1323 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 N4BP3O15049 544 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 INPPL1O15357 1258 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 NCK2O43639 380 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 YEATS4O95619 227 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 NUDT7P0C024 238 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 LIG1P18858 919 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 PLCG1P19174 1290 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 DNAJB1P25685 340 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 PPM1AP35813 382 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 TXLNAP40222 546 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 BCAR1P56945 870 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
CD48-202ENST00000368046 RNASELQ05823 741 aaKnown RBP10.85□□□□□ -0.67
CD48-202ENST00000368046 RAD51AP2Q09MP3 1159 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 DMP1Q13316 513 aaPredicted RBP10.85□□□□□ -0.67
CD48-202ENST00000368046 GIT2Q14161 759 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 MCM6Q14566 821 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 TMEM132AQ24JP5 1023 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 AAK1Q2M2I8 961 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 NT5DC1Q5TFE4 455 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 PDE12Q6L8Q7 609 aaKnown RBP10.85□□□□□ -0.67
CD48-202ENST00000368046 MRPS27Q92552 414 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms