RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 A0A0G2JND7 137 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 TDP2O95551 362 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 ECE1P42892 770 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 PSMD6Q15008 389 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 KLC3Q6P597 504 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 PCIF1Q9H4Z3 704 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 MUTP22033 750 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 M0QZ92 97 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 RAD51CO43502 376 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 ELF1P32519 619 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 GPS1Q13098 491 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 SLC35G2Q8TBE7 412 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 PPARGC1AQ9UBK2 798 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 XRN1Q8IZH2 1706 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 GALCP54803 685 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 SPDYCQ5MJ68 293 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 HPS3Q969F9 1004 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 RPS6KC1Q96S38 1066 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 GSTA2P09210 222 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 TEDDM1Q5T9Z0 273 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 SERPINB12Q96P63 405 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 TLK1Q9UKI8 766 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 ATRNO75882 1429 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 PFDN1O60925 122 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 TRIP13Q15645 432 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 LRRC23Q53EV4 343 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 RAB44Q7Z6P3 723 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 SH2D3CQ8N5H7 860 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 SH3GL3Q99963 347 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 PARVAQ9NVD7 372 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 P4HBP07237 508 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 HDLBPQ00341 1268 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 MTMR1Q13613 665 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 TRIM15Q9C019 465 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 ASNSD1Q9NWL6 643 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 ARHGEF37A1IGU5 675 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 MAP2K7O14733 419 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 ASAP2O43150 1006 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 CHN1P15882 459 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 HOXA13P31271 388 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 JAMLQ86YT9 394 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 CCDC68Q9H2F9 335 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 O00370 1275 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 GGA2Q9UJY4 613 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 ATXN2Q99700 1313 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 MRPS35P82673 323 aaKnown RBP12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 TRABDQ9H4I3 376 aa12.55□□□□□ -0.4
CDC42BPA-202ENST00000366764 HSD17B3P37058 310 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 PSMC5P62195 406 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 CENPCQ03188 943 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 KRT17Q04695 432 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 RCOR2Q8IZ40 523 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 WWP1Q9H0M0 922 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 CSADQ9Y600 493 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 GOLGA8SH3BPF8 625 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 IGBP1P78318 339 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 MAPK7Q13164 816 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 ART3Q13508 389 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 ARHGAP10A1A4S6 786 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 TAF1BQ53T94 588 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 FBXO33Q7Z6M2 555 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 MS4A14Q96JA4 679 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 CYTH2Q99418 400 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 ST3GAL1Q11201 340 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 POLR3CQ9BUI4 534 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 RGL2O15211 777 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 TOM1L1O75674 476 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 IZUMO3Q5VZ72 239 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 PSMC3IPQ9P2W1 217 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 TRIM10Q9UDY6 481 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 GDF11O95390 407 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 RPA1P27694 616 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 KLHDC7AQ5VTJ3 777 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 PPWD1Q96BP3 646 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 WHRNQ9P202 907 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 NAGPAQ9UK23 515 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 ORC6Q9Y5N6 252 aa12.54□□□□□ -0.4
CDC42BPA-202ENST00000366764 FLT1P17948 1338 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 MX2P20592 715 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 YTHDF3Q7Z739 585 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 PPP4CP60510 307 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 PPP2R5DQ14738 602 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 TBCCQ15814 346 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZNF667Q5HYK9 610 aa12.53□□□□□ -0.4
CDC42BPA-202ENST00000366764 DEPDC1BQ8WUY9 529 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms