RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 TDP2O95551 362 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 SOD2P04179 222 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
MRPL55-213ENST00000366740 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 MOXD1Q6UVY6 613 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 SIX5Q8N196 739 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 ETNPPLQ8TBG4 499 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 NLRP4Q96MN2 994 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 JPH2Q9BR39 696 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-213ENST00000366740 HERC2P3Q9BVR0 1158 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 RSAD1Q9HA92 442 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 MRPL17Q9NRX2 175 aaKnown RBP13.04□□□□□ -0.32
MRPL55-213ENST00000366740 MARCH5Q9NX47 278 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 KANSL3Q9P2N6 904 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 COL4A3Q01955 1670 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 COL4A2P08572 1712 aa13.04□□□□□ -0.32
MRPL55-213ENST00000366740 KRBA1A5PL33 1030 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 NRP1O14786 923 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 INPPL1O15357 1258 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 SSBP05455 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
MRPL55-213ENST00000366740 PSMC5P62195 406 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 INF2Q27J81 1249 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 SRGAP1Q7Z6B7 1085 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 CCDC83Q8IWF9 413 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 RPS6KC1Q96S38 1066 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 SEMA4AQ9H3S1 761 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
MRPL55-213ENST00000366740 EPS15L1Q9UBC2 864 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 SSX2IPQ9Y2D8 614 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 FAN1Q9Y2M0 1017 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 COL4A3BPQ9Y5P4 624 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 CLUHO75153 1309 aa13.03□□□□□ -0.32
MRPL55-213ENST00000366740 TICRRQ7Z2Z1 1910 aa13.02□□□□□ -0.32
MRPL55-213ENST00000366740 MYH11P35749 1972 aa13.02□□□□□ -0.32
MRPL55-213ENST00000366740 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 TEX28O15482 410 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
MRPL55-213ENST00000366740 C1RP00736 705 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 ALDH2P05091 517 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 URODP06132 367 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 ADH1AP07327 375 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
MRPL55-213ENST00000366740 HOXA11P31270 313 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-213ENST00000366740 FOSBP53539 338 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 NR5A1Q13285 461 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.33
MRPL55-213ENST00000366740 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 KRT25Q7Z3Z0 450 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 COLGALT2Q8IYK4 626 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 HDAC7Q8WUI4 952 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 STAMQ92783 540 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 NXPE3Q969Y0 559 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 FAM193BQ96PV7 902 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-213ENST00000366740 DHX33Q9H6R0 707 aaKnown RBP13.02□□□□□ -0.33
MRPL55-213ENST00000366740 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 PPME1Q9Y570 386 aa13.02□□□□□ -0.33
MRPL55-213ENST00000366740 CCDC195A0A1B0GUA6 201 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 GLUD1P00367 558 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 POMCP01189 267 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 CFHP08603 1231 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 SRFP11831 508 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 XBP1P17861 261 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 GLUD2P49448 558 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 DSC1Q08554 894 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 KIAA0319Q5VV43 1072 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 PIK3AP1Q6ZUJ8 805 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
MRPL55-213ENST00000366740 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 RSAD2Q8WXG1 361 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 SLC7A3Q8WY07 619 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 WASF1Q92558 559 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 ZNF707Q96C28 371 aaPredicted RBP13.01□□□□□ -0.33
MRPL55-213ENST00000366740 UBN1Q9NPG3 1134 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 DPP7Q9UHL4 492 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
MRPL55-213ENST00000366740 CCDC194A0A1B0GVG4 234 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 BTBD18B2RXH4 712 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 EML1O00423 815 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 C2CD2LO14523 706 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 SLC37A4O43826 429 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 RFPL2O75678 378 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 LMNAP02545 664 aaKnown RBP13□□□□□ -0.33
MRPL55-213ENST00000366740 GBP2P32456 591 aaPredicted RBP13□□□□□ -0.33
MRPL55-213ENST00000366740 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
MRPL55-213ENST00000366740 NPEPPSP55786 919 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 DSG1Q02413 1049 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 RABEP1Q15276 862 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 ELMSAN1Q6PJG2 1045 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 EXOC8Q8IYI6 725 aa13□□□□□ -0.33
MRPL55-213ENST00000366740 SLC44A3Q8N4M1 653 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms