RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 VIPAS39Q9H9C1 493 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 MORC2Q9Y6X9 1032 aaPredicted RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 ALDH18A1P54886 795 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 KCTD2Q14681 263 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 MAPRE1Q15691 268 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 STON1Q9Y6Q2 735 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 TALDO1P37837 337 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 NCKAP1LP55160 1127 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 MEI1Q5TIA1 1274 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 TMEM154Q6P9G4 183 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 LRRC49Q8IUZ0 686 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SDR42E1Q8WUS8 393 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SLITRK6Q9H5Y7 841 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 UTP6Q9NYH9 597 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 GPC5P78333 572 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SETD3Q86TU7 594 aaPredicted RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 DEPDC7Q96QD5 511 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 ATXN3P54252 364 aaPredicted RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 NCF4Q15080 339 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 TMC5Q6UXY8 1006 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 NUP93Q8N1F7 819 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 OMA1Q96E52 524 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 CCT7Q99832 543 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 IMPAD1Q9NX62 359 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 PDIA2Q13087 525 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 RASGRF1Q13972 1273 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 LLGL1Q15334 1064 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 IYDQ6PHW0 289 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SH3KBP1Q96B97 665 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 MYO1GB0I1T2 1018 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 CLIC2O15247 247 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 ENO1P06733 434 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SRLQ86TD4 932 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 TTC30BQ8N4P2 665 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 TSPAN17Q96FV3 270 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SLC13A1Q9BZW2 595 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 PBRM1Q86U86 1689 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 A0A0D9SFI3 127 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SAC3D1A6NKF1 404 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 PLCG1P19174 1290 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 CCNE1P24864 410 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 CCDC137Q6PK04 289 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 P3H2Q8IVL5 708 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 NPHS2Q9NP85 383 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 PLB1Q6P1J6 1458 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 ADGRA3Q8IWK6 1321 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SYNDIG1LA6NDD5 238 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 LAMB3Q13751 1172 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 MXD3Q9BW11 206 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SARS2Q9NP81 518 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 PSD3Q9NYI0 1048 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 CCNL1Q9UK58 526 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 TNPO2O14787 897 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 BIRC5O15392 142 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 TRIM49P0CI25 452 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 TRIM49CP0CI26 452 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 DDI1Q8WTU0 396 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 FOPNLQ96NB1 174 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 BPIFA3Q9BQP9 254 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 CDKL3Q8IVW4 592 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 AP5M1Q9H0R1 490 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 HMOX2P30519 316 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 THEMIS2Q5TEJ8 643 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 KRT77Q7Z794 578 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 STAP1Q9ULZ2 295 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 USP15Q9Y4E8 981 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SRP72O76094 671 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 FGAP02671 866 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 PSAPP07602 524 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 DPP9Q86TI2 863 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 TTC39CQ8N584 583 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SMARCAD1Q9H4L7 1026 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 MYH9P35579 1960 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 AGTP01019 485 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 POTEEQ6S8J3 1075 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 DNAJC9Q8WXX5 260 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 PITPNM2Q9BZ72 1349 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 UBAP1LF5GYI3 381 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 ZNF667Q5HYK9 610 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 TTC33Q6PID6 262 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 RBM46Q8TBY0 533 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 BFARQ9NZS9 450 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 K7ERI5 159 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 BYSLQ13895 437 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 STAT4Q14765 748 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 EFHC2Q5JST6 749 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SLC10A5Q5PT55 438 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 APPL2Q8NEU8 664 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 TCP11X1B4DZS4 312 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 ACADSP16219 412 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 ADD1P35611 737 aaKnown RBP9.81□□□□□ -0.84
VPS13A-203ENST00000360280 HIC2Q96JB3 615 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 PRKAG2Q9UGJ0 569 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 JAK3P52333 1124 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SPDYAQ5MJ70 313 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 TRIM72Q6ZMU5 477 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 SCARA5Q6ZMJ2 495 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 PPM1NQ8N819 430 aa9.81□□□□□ -0.84
VPS13A-203ENST00000360280 S100A9P06702 114 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms