RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 SLF2Q8IX21 1173 aa11.71□□□□□ -0.53
RPE-202ENST00000359429 CCDC105Q8IYK2 499 aa11.71□□□□□ -0.53
RPE-202ENST00000359429 CERS5Q8N5B7 392 aa11.71□□□□□ -0.53
RPE-202ENST00000359429 KAT5Q92993 513 aa11.71□□□□□ -0.53
RPE-202ENST00000359429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.71□□□□□ -0.534e-6■■■■■ 111.8
RPE-202ENST00000359429 AGPAT3Q9NRZ7 376 aa11.71□□□□□ -0.53
RPE-202ENST00000359429 DMAC2Q9NW81 257 aa11.71□□□□□ -0.53
RPE-202ENST00000359429 CHMP2AO43633 222 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 SLITRK3O94933 977 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 EEF2P13639 858 aaKnown RBP11.71□□□□□ -0.54
RPE-202ENST00000359429 HADHBP55084 474 aaKnown RBP11.71□□□□□ -0.54
RPE-202ENST00000359429 MYL7Q01449 175 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 AP3B2Q13367 1082 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.54
RPE-202ENST00000359429 NUGGCQ68CJ6 796 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 MFSD5Q6N075 450 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 C11orf63Q6NUN7 778 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 ZNF720Q7Z2F6 126 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 TPH2Q8IWU9 490 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 RHOT2Q8IXI1 618 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 FITM2Q8N6M3 262 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 TBC1D16Q8TBP0 767 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 ARHGEF2Q92974 986 aaKnown RBP11.71□□□□□ -0.54
RPE-202ENST00000359429 CD101Q93033 1021 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 ZNF570Q96NI8 536 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 HSD17B14Q9BPX1 270 aa11.71□□□□□ -0.54
RPE-202ENST00000359429 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.54
RPE-202ENST00000359429 DNAJC17Q9NVM6 304 aaKnown RBP11.71□□□□□ -0.54
RPE-202ENST00000359429 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 TISP43B9A030 160 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 EIF3DO15371 548 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPE-202ENST00000359429 ATP2B4P23634 1241 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 CHKAP35790 457 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 SREBF1P36956 1147 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 SCNN1DP51172 638 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 BNIP1Q12981 228 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 CGB2Q6NT52 195 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 SLC13A5Q86YT5 568 aaPredicted RBP11.7□□□□□ -0.54
RPE-202ENST00000359429 SIAH1Q8IUQ4 282 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 RPUSD2Q8IZ73 545 aaKnown RBP11.7□□□□□ -0.54
RPE-202ENST00000359429 UBL4BQ8N7F7 174 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 MAB21L3Q8N8X9 362 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 ANKRD42Q8N9B4 389 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 CNBD1Q8NA66 436 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 GDAP1Q8TB36 358 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 DYDC1Q8WWB3 177 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 DYDC2Q96IM9 177 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 RMDN2Q96LZ7 410 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 FAM20AQ96MK3 541 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 POLR3CQ9BUI4 534 aaPredicted RBP11.7□□□□□ -0.54
RPE-202ENST00000359429 WRAP73Q9P2S5 460 aaPredicted RBP11.7□□□□□ -0.54
RPE-202ENST00000359429 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
RPE-202ENST00000359429 DIAPH2O60879 1101 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 MGAT5Q09328 741 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 SLMAPQ14BN4 828 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 ZKSCAN8Q15776 578 aaPredicted RBP11.7□□□□□ -0.54
RPE-202ENST00000359429 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 NFIL3Q16649 462 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 CYP1B1Q16678 543 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 SEPT14Q6ZU15 432 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 TAOK1Q7L7X3 1001 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 PWWP2AQ96N64 755 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
RPE-202ENST00000359429 GLT8D2Q9H1C3 349 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 PARVGQ9HBI0 331 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 STK38LQ9Y2H1 464 aa11.7□□□□□ -0.54
RPE-202ENST00000359429 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 NEBLO76041 1014 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 SGPL1O95470 568 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 GAP43P17677 238 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 CHRNB2P17787 502 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 COPS2P61201 443 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 GPC5P78333 572 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 BFSP1Q12934 665 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
RPE-202ENST00000359429 PRR5LQ6MZQ0 368 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 ERICH1Q86X53 443 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 CYP4X1Q8N118 509 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 ZSWIM2Q8NEG5 633 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 TBC1D22AQ8WUA7 517 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 C1orf54Q8WWF1 131 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 RPGRQ92834 1020 aaKnown RBP11.69□□□□□ -0.54
RPE-202ENST00000359429 KLHL29Q96CT2 875 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 RSRC1Q96IZ7 334 aaKnown RBP11.69□□□□□ -0.54
RPE-202ENST00000359429 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 FRMD4BQ9Y2L6 1034 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 CETPP11597 493 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 HSPA6P17066 643 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 CIITAP33076 1130 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 PPP3CAQ08209 521 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 ADCY1Q08828 1119 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 TNIP1Q15025 636 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
RPE-202ENST00000359429 SEL1L2Q5TEA6 688 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 FAM178BQ8IXR5 827 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms