RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 STAM2O75886 525 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 COMTP21964 271 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 CHRNA3P32297 505 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 HSD17B3P37058 310 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 MTMR2Q13614 643 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 SNRNP35Q16560 246 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 KIAA1755Q5JYT7 1200 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 CEP128Q6ZU80 1094 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 TBC1D1Q86TI0 1168 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 TSEN2Q8NCE0 465 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 THOC1Q96FV9 657 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 MKNK1Q9BUB5 465 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 ISCUQ9H1K1 167 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 MRPL47Q9HD33 250 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 AIPL1Q9NZN9 384 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 TTC7AQ9ULT0 858 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 SLC12A3P55017 1021 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 NUGGCQ68CJ6 796 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 DNAJC24Q6P3W2 148 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 PAF1Q8N7H5 531 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 TRIM11Q96F44 468 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 CDHR1Q96JP9 859 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 PI4K2AQ9BTU6 479 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 IKZF4Q9H2S9 585 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 MEIS2O14770 477 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 TNNC2P02585 160 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ZNF131P52739 623 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
COL20A1-201ENST00000358894 C6orf118Q5T5N4 469 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 PALM2Q8IXS6 379 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 THNSL1Q8IYQ7 743 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 CSADQ9Y600 493 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 CLDN3O15551 220 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 BAG6P46379 1132 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ADCY2Q08462 1091 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 PRAMEF18Q5VWM3 479 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ELMO3Q96BJ8 720 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 FAM118BQ9BPY3 351 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
COL20A1-201ENST00000358894 PNMA2Q9UL42 364 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 TRAF3IP3Q9Y228 551 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ENO4A6NNW6 628 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 RXRBP28702 533 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ACOT2P49753 483 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 C2CD6Q53TS8 623 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ZNF720Q7Z2F6 126 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 JAMLQ86YT9 394 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 FAM167BQ9BTA0 163 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 ATP6V0A4Q9HBG4 840 aa13.11□□□□□ -0.31
COL20A1-201ENST00000358894 F8VZ95 297 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 RTN2O75298 545 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 PLS3P13797 630 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 Q4G0T1 1027 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 PPFIBP2Q8ND30 876 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 DNAI2Q9GZS0 605 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 FAM187AA6NFU0 413 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 SUN1O94901 812 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 SLITRK3O94933 977 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 SCP2P22307 547 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 MAN1A1P33908 653 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 HADHQ16836 314 aaKnown RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 FYB2Q5VWT5 728 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 NSUN6Q8TEA1 469 aaKnown RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 RIT2Q99578 217 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 FERMT1Q9BQL6 677 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 KCNMB3Q9NPA1 279 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 NFIBO00712 420 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 PPP1R12AO14974 1030 aaPredicted RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 RFX1P22670 979 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 ANXA13P27216 316 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 HMGCS2P54868 508 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 BSPRYQ5W0U4 402 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 ZNF473Q8WTR7 871 aaKnown RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 NLRP4Q96MN2 994 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms