RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 SHOX2O60902 331 aaPredicted RBP17.3■□□□□ 0.36
PTPN5-201ENST00000358540 MXI1P50539 228 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 SMTNP53814 917 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 SNRNP35Q16560 246 aaKnown RBP17.3■□□□□ 0.36
PTPN5-201ENST00000358540 C8orf74Q6P047 294 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 CCNI2Q6ZMN8 369 aaPredicted RBP17.3■□□□□ 0.36
PTPN5-201ENST00000358540 MOB2Q70IA6 237 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 TAF4BQ92750 862 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 XPNPEP1Q9NQW7 623 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 NENFQ9UMX5 172 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 RLFQ13129 1914 aa17.3■□□□□ 0.36
PTPN5-201ENST00000358540 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
PTPN5-201ENST00000358540 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
PTPN5-201ENST00000358540 GOLGA6BA6NDN3 693 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 MYO1FO00160 1098 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 STBD1O95210 358 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 MAPTP10636 758 aaKnown RBP17.29■□□□□ 0.36
PTPN5-201ENST00000358540 ALCAMQ13740 583 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 SLC39A4Q6P5W5 647 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 KLHL7Q8IXQ5 586 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 GPC2Q8N158 579 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 SAMD3Q8N6K7 520 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 ATP6V0A1Q93050 837 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 KRT12Q99456 494 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 PAGR1Q9BTK6 254 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 SELENOOQ9BVL4 669 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 PSAPP07602 524 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 DLATP10515 647 aaKnown RBP17.29■□□□□ 0.36
PTPN5-201ENST00000358540 TNFAIP3P21580 790 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 IBSPP21815 317 aaPredicted RBP17.29■□□□□ 0.36
PTPN5-201ENST00000358540 OAZ1P54368 228 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 SUPT20HL1Q3ZLR7 823 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 DAAM2Q86T65 1068 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 PPM1KQ8N3J5 372 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 LRRC57Q8N9N7 239 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 SEMA4DQ92854 862 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 ARHGEF26Q96DR7 871 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 BICD1Q96G01 975 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 HOXC10Q9NYD6 342 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 TSKSQ9UJT2 592 aa17.29■□□□□ 0.36
PTPN5-201ENST00000358540 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 CEP104O60308 925 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 KIF4AO95239 1232 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 MCM3P25205 808 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 C10orf76Q5T2E6 689 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 LMBRD2Q68DH5 695 aaPredicted RBP17.28■□□□□ 0.36
PTPN5-201ENST00000358540 SLC30A5Q8TAD4 765 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 TMEM143Q96AN5 459 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 BTBD7Q9P203 1132 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 HNRNPDLO14979 420 aaKnown RBP17.28■□□□□ 0.36
PTPN5-201ENST00000358540 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 ZNF572Q7Z3I7 529 aaPredicted RBP17.28■□□□□ 0.36
PTPN5-201ENST00000358540 POLR3FQ9H1D9 316 aaPredicted RBP17.28■□□□□ 0.36
PTPN5-201ENST00000358540 KIAA1217Q5T5P2 1943 aa17.28■□□□□ 0.36
PTPN5-201ENST00000358540 CALCAP01258 141 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 EPC2Q52LR7 807 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 XRRA1Q6P2D8 792 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 SND1Q7KZF4 910 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPN5-201ENST00000358540 PEX26Q7Z412 305 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 MAP4K3Q8IVH8 894 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 AP1M1Q9BXS5 423 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 THAP2Q9H0W7 228 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 CYP26B1Q9NR63 512 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 LMNB1P20700 586 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 CETN1Q12798 172 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 NCAPG2Q86XI2 1143 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 OTUD5Q96G74 571 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 CLMNQ96JQ2 1002 aa17.27■□□□□ 0.36
PTPN5-201ENST00000358540 GLI1P08151 1106 aa17.27■□□□□ 0.35
PTPN5-201ENST00000358540 MYBPC2Q14324 1141 aa17.27■□□□□ 0.35
PTPN5-201ENST00000358540 TRADDQ15628 312 aa17.27■□□□□ 0.35
PTPN5-201ENST00000358540 GNPTABQ3T906 1256 aa17.27■□□□□ 0.35
PTPN5-201ENST00000358540 ABHD15Q6UXT9 468 aa17.27■□□□□ 0.35
PTPN5-201ENST00000358540 SLC35G2Q8TBE7 412 aa17.27■□□□□ 0.35
PTPN5-201ENST00000358540 SPATA31C2B4DYI2 1134 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 EIF3HO15372 352 aaKnown RBP eCLIP17.26■□□□□ 0.35
PTPN5-201ENST00000358540 C12orf56Q8IXR9 622 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 OTUD6BQ8N6M0 293 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 GIMAP7Q8NHV1 300 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 CABS1Q96KC9 395 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 PI4K2AQ9BTU6 479 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 ST6GALNAC4Q9H4F1 302 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 STIM2Q9P246 746 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 EXOC7Q9UPT5 735 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 BUB1BO60566 1050 aaPredicted RBP17.26■□□□□ 0.35
PTPN5-201ENST00000358540 SGPL1O95470 568 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 METTL13Q8N6R0 699 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 TAS1R2Q8TE23 839 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 IFT81Q8WYA0 676 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 CTNNBL1Q8WYA6 563 aaPredicted RBP17.26■□□□□ 0.35
PTPN5-201ENST00000358540 AGPAT1Q99943 283 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 FAM213AQ9BRX8 229 aa17.26■□□□□ 0.35
PTPN5-201ENST00000358540 BTNL10A8MVZ5 291 aa17.25■□□□□ 0.35
PTPN5-201ENST00000358540 NDUFAB1O14561 156 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms