RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 FMNL3Q8IVF7 1028 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 IFT20Q8IY31 132 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 RAET1EQ8TD07 263 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 TRERF1Q96PN7 1200 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 SMARCAL1Q9NZC9 954 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 EHD2Q9NZN4 543 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 LARSQ9P2J5 1176 aaKnown RBP15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 NAGPAQ9UK23 515 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 INTUQ9ULD6 942 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 MCM3APO60318 1980 aa15.5■□□□□ 0.07
NIPAL3-203ENST00000358028 OPA1O60313 960 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 EXOC3O60645 756 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 FTCDO95954 541 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 MYCLP12524 364 aaPredicted RBP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 OAZ1P54368 228 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 GRB14Q14449 540 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 MORN1Q5T089 497 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 MAEAQ7L5Y9 396 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 INTS2Q9H0H0 1204 aaKnown RBP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 MROH8Q9H579 483 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 TMEM206Q9H813 350 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 PXMP2Q9NR77 195 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 DMGDHQ9UI17 866 aaKnown RBP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 GOLGA8KD6RF30 607 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 SLC25A27O95847 323 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 TRIM49P0CI25 452 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 TRIM49CP0CI26 452 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 PLS3P13797 630 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 SOX5P35711 763 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 GGCXP38435 758 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 JAK3P52333 1124 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 MYL7Q01449 175 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 CBWD6Q4V339 395 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 CBWD3Q5JTY5 395 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 CBWD5Q5RIA9 395 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 ALKBH5Q6P6C2 394 aaKnown RBP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 SND1Q7KZF4 910 aaKnown RBP eCLIP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 SOCS4Q8WXH5 440 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 USP6NLQ92738 828 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 CCDC43Q96MW1 224 aaKnown RBP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 ACCSQ96QU6 501 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 RMDN3Q96TC7 470 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 PDCD2LQ9BRP1 358 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 TIPINQ9BVW5 301 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 STK33Q9BYT3 514 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 RBM12Q9NTZ6 932 aaKnown RBP15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 DNAJC12Q9UKB3 198 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 IVNS1ABPQ9Y6Y0 642 aa15.49■□□□□ 0.07
NIPAL3-203ENST00000358028 A0A0A6YYK5 440 aaPredicted RBP15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 F8VZ95 297 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 AGPSO00116 658 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 ELNP15502 786 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 CYP2B6P20813 491 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 YWHABP31946 246 aaKnown RBP15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 BFSP1Q12934 665 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 IRF5Q13568 498 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 UGCGQ16739 394 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 ARHGEF16Q5VV41 709 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 NSMFQ6X4W1 530 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 C12orf56Q8IXR9 622 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 C4orf19Q8IY42 314 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 EIF1ADQ8N9N8 165 aaKnown RBP15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 HDAC7Q8WUI4 952 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 TAF4BQ92750 862 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 PBKQ96KB5 322 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 INPP4AQ96PE3 977 aaPredicted RBP15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 SH3GL2Q99962 352 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 GDF3Q9NR23 364 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 RNF146Q9NTX7 359 aa15.48■□□□□ 0.07
NIPAL3-203ENST00000358028 DDX3XO00571 662 aaKnown RBP eCLIP15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 PHACTR2O75167 634 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 KRT13P13646 458 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 ADORA2AP29274 412 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 PSMC5P62195 406 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 TNNC1P63316 161 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 KRT76Q01546 638 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 PAK2Q13177 524 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 GSPT2Q8IYD1 628 aaKnown RBP15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 TMEM174Q8WUU8 243 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 LMBR1Q8WVP7 490 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 MS4A14Q96JA4 679 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 SLC15A5A6NIM6 579 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 WDR64B1ANS9 1081 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 BACH1O14867 736 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 ADCY3O60266 1144 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 EVI5O60447 810 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 ATP9AO75110 1047 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 H2AFZP0C0S5 128 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 SFNP31947 248 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 COPB2P35606 906 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 PPFIA1Q13136 1202 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 MAP2K5Q13163 448 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 DRAP1Q14919 205 aaPredicted RBP15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 RPS6KA1Q15418 735 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 XRRA1Q6P2D8 792 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 H2AFVQ71UI9 128 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 FAM76AQ8TAV0 307 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms