RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 RELL1Q8IUW5 271 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ACCSQ96QU6 501 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 VPS45Q9NRW7 570 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 GCNT4Q9P109 453 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SHOC2Q9UQ13 582 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PDE1BQ01064 536 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 NTRK3Q16288 839 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SSU72Q9NP77 194 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 DNAJB1P25685 340 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 NT5C1BQ96P26 610 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 GPAMQ9HCL2 828 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF839A8K0R7 811 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PHKG2P15735 406 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MEI1Q5TIA1 1274 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ACAD11Q709F0 780 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TBC1D1Q86TI0 1168 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF184Q99676 751 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 AK5Q9Y6K8 562 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TMEM120BA0PK00 339 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 BTBD19C9JJ37 291 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PMM2O15305 246 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ECE1P42892 770 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 BNC1Q01954 994 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 KLHDC7AQ5VTJ3 777 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF233A6NK53 670 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PSMD3O43242 534 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 FGRP09769 529 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MMP13P45452 471 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 E2F5Q15329 346 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SLC35G2Q8TBE7 412 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 OLFML3Q9NRN5 406 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MCF2LO15068 1137 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PFDN6O15212 129 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SLC22A2O15244 555 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CXCR5P32302 372 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 RPL5P46777 297 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 NR2C2P49116 596 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PDXDC2PQ6P474 469 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SLFN11Q7Z7L1 901 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 INPP4AQ96PE3 977 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TRPC7Q9HCX4 862 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 APEX2Q9UBZ4 518 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 HSPA2P54652 639 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ZC3H18Q86VM9 953 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 VPS33BQ9H267 617 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 DHX36Q9H2U1 1008 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 EHD2Q9NZN4 543 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 DCDC2Q9UHG0 476 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ARHGAP42A6NI28 874 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PHF20L1A8MW92 1017 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MAFGO15525 162 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SRGAP2O75044 1071 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 APOA1P02647 267 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MAPK4P31152 587 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CTCFP49711 727 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TMED10P49755 219 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ANKRD40Q6AI12 368 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ADGRB1O14514 1584 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 DNAJB2P25686 324 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CYP1B1Q16678 543 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 KYNUQ16719 465 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 XRRA1Q6P2D8 792 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ALLCQ8N6M5 410 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 BTBD10Q9BSF8 475 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 THAP1Q9NVV9 213 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ADCY3O60266 1144 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 THRAP10827 490 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TXKP42681 527 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PHKA1P46020 1223 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PDPRQ8NCN5 879 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC138Q96M89 665 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 YIPF3Q9GZM5 350 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PTTG2Q9NZH5 202 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 IGKV5-2P06315 115 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC130P13994 396 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SERPINB6P35237 376 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CTDSPL2Q05D32 466 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MMEL1Q495T6 779 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 USP6NLQ92738 828 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SLIT1O75093 1534 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CFAP69A5D8W1 941 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 FOXO3O43524 673 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 POLR2EP19388 210 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CA4P22748 312 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CDK7P50613 346 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MYL7Q01449 175 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PTP4A2Q12974 167 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 INAQ16352 499 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC137Q6PK04 289 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 GSDMBQ8TAX9 411 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SAGE2PA6NJ88 616 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MECOMQ03112 1051 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SLC34A1Q06495 639 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 BARGINQ6ZT62 677 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DDX23Q9BUQ8 820 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 CALB1P05937 261 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MCF2P10911 925 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 NFIL3Q16649 462 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 NLRP10Q86W26 655 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 B4GALNT2Q8NHY0 566 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms