RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CNKSR3Q6P9H4 555 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 ZPBP2Q6X784 338 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 RTN4RL1Q86UN2 441 aaPredicted RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 LINC01599Q8WXQ3 324 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 APBB2Q92870 758 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 LBHD1Q9BQE6 289 aaPredicted RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 GTPBP4Q9BZE4 634 aaKnown RBP16.3■□□□□ 0.2
CCNE1-202ENST00000357943 HAPLN2Q9GZV7 340 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 KCTD10Q9H3F6 313 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 PDZD7Q9H5P4 517 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 PTPRHQ9HD43 1115 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 EXOC7Q9UPT5 735 aa16.3■□□□□ 0.2
CCNE1-202ENST00000357943 ABLIM1O14639 778 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 TOM1L1O75674 476 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 KIF20AO95235 890 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 PFKMP08237 780 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 ZSCAN20P17040 1043 aaPredicted RBP16.29■□□□□ 0.2
CCNE1-202ENST00000357943 PROZP22891 400 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 DSC3Q14574 896 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 TWF2Q6IBS0 349 aaKnown RBP16.29■□□□□ 0.2
CCNE1-202ENST00000357943 KLHL10Q6JEL2 608 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 ADAM2Q99965 735 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 FTHL17Q9BXU8 183 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 GBP3Q9H0R5 595 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
CCNE1-202ENST00000357943 CHST12Q9NRB3 414 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 ANKFY1Q9P2R3 1169 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 TNFSF13BQ9Y275 285 aa16.29■□□□□ 0.2
CCNE1-202ENST00000357943 LETM1O95202 739 aaPredicted RBP16.28■□□□□ 0.2
CCNE1-202ENST00000357943 ADSSP30520 456 aa16.28■□□□□ 0.2
CCNE1-202ENST00000357943 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
CCNE1-202ENST00000357943 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
CCNE1-202ENST00000357943 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
CCNE1-202ENST00000357943 EIF2AQ9BY44 585 aaKnown RBP16.28■□□□□ 0.2
CCNE1-202ENST00000357943 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
CCNE1-202ENST00000357943 H0YGN5 161 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 CLDN3O15551 220 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.2
CCNE1-202ENST00000357943 TYRO3Q06418 890 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 STIM1Q13586 685 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 IKBKEQ14164 716 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 ZNF568Q3ZCX4 644 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 SLC27A1Q6PCB7 646 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 ZNF365Q70YC5 407 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 ZBTB33Q86T24 672 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 MLKLQ8NB16 471 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCNE1-202ENST00000357943 CBWD1Q9BRT8 395 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 CDT1Q9H211 546 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 TSPYL2Q9H2G4 693 aaPredicted RBP16.27■□□□□ 0.2
CCNE1-202ENST00000357943 AGPAT3Q9NRZ7 376 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 RGS18Q9NS28 235 aa16.27■□□□□ 0.2
CCNE1-202ENST00000357943 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.27■□□□□ 0.19
CCNE1-202ENST00000357943 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 ENPP3O14638 875 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 N4BP3O15049 544 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 CLIC2O15247 247 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 NPTXRO95502 500 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 HARSP12081 509 aaKnown RBP16.27■□□□□ 0.19
CCNE1-202ENST00000357943 MATR3P43243 847 aaKnown RBP eCLIP16.27■□□□□ 0.19
CCNE1-202ENST00000357943 MCL1Q07820 350 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 TMEM240Q5SV17 173 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 CENPPQ6IPU0 288 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 CCDC51Q96ER9 411 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 ADPGKQ9BRR6 497 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 FUCA2Q9BTY2 467 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 FAM105AQ9NUU6 356 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 TYW1Q9NV66 732 aaKnown RBP16.27■□□□□ 0.19
CCNE1-202ENST00000357943 STYXL1Q9Y6J8 313 aa16.27■□□□□ 0.19
CCNE1-202ENST00000357943 PDXKO00764 312 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 PSMA7O14818 248 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 FGBP02675 491 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 IBSPP21815 317 aaPredicted RBP16.26■□□□□ 0.19
CCNE1-202ENST00000357943 PPP1R2P41236 205 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 NOLC1Q14978 699 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCNE1-202ENST00000357943 STX1AQ16623 288 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 ZCWPW2Q504Y3 356 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 ARMCX5Q6P1M9 558 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCNE1-202ENST00000357943 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 CEP120Q8N960 986 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 NELFBQ8WX92 580 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 POMGNT1Q8WZA1 660 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 DHTKD1Q96HY7 919 aaPredicted RBP16.26■□□□□ 0.19
CCNE1-202ENST00000357943 TRAIPQ9BWF2 469 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 TRIM6Q9C030 488 aaPredicted RBP16.26■□□□□ 0.19
CCNE1-202ENST00000357943 PCIF1Q9H4Z3 704 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 ANO10Q9NW15 660 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 TRAF3IP3Q9Y228 551 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 HES2Q9Y543 173 aa16.26■□□□□ 0.19
CCNE1-202ENST00000357943 A0A0B4J269 797 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 A0A0U1RQF3 1178 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 C9IYK1 514 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 STX17P56962 302 aa16.25■□□□□ 0.19
CCNE1-202ENST00000357943 MLLT1Q03111 559 aaPredicted RBP16.25■□□□□ 0.19
CCNE1-202ENST00000357943 PAK1Q13153 545 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms