RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 DSG3P32926 999 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 TMEM132BQ14DG7 1078 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 CFAP58Q5T655 872 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 DCAF12L1Q5VU92 463 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 SWSAP1Q6NVH7 229 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 RDM1Q8NG50 284 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
PHTF1-201ENST00000357783 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 KREMEN1Q96MU8 473 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 AMACRQ9UHK6 382 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 TTMPQ5BVD1 217 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 ATP6V0A1Q93050 837 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 ISCUQ9H1K1 167 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 CTTNBP2NLQ9P2B4 639 aa17.11■□□□□ 0.33
PHTF1-201ENST00000357783 CHORDC1Q9UHD1 332 aaPredicted RBP17.11■□□□□ 0.33
PHTF1-201ENST00000357783 SEPT9Q9UHD8 586 aaPredicted RBP17.11■□□□□ 0.33
PHTF1-201ENST00000357783 CCDC188H7C350 402 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 KRT14P02533 472 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 SLC39A4Q6P5W5 647 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 NOP9Q86U38 636 aaKnown RBP17.1■□□□□ 0.33
PHTF1-201ENST00000357783 KIFAP3Q92845 792 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-201ENST00000357783 ZNF112Q9UJU3 913 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 PFASO15067 1338 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 ADGRA3Q8IWK6 1321 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 TMEM110-MUSTN1A8MSY1 372 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 CYP26A1O43174 497 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 ZNF211Q13398 564 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-201ENST00000357783 ADAT2Q7Z6V5 191 aaKnown RBP17.1■□□□□ 0.33
PHTF1-201ENST00000357783 POMGNT1Q8WZA1 660 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 PCDHB18PQ96TA0 734 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
PHTF1-201ENST00000357783 DNAJC21Q5F1R6 531 aaKnown RBP17.09■□□□□ 0.33
PHTF1-201ENST00000357783 KRT39Q6A163 491 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 LRRC31Q6UY01 552 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 SLC47A2Q86VL8 602 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-201ENST00000357783 FAM71AQ8IYT1 594 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 IQCKQ8N0W5 287 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 MREGQ8N565 214 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 EPS8L1Q8TE68 723 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 PARD3BQ8TEW8 1205 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 HVCN1Q96D96 273 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 NR2E1Q9Y466 385 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 STBD1O95210 358 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 PSAPP07602 524 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 CHRNB2P17787 502 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 ECHS1P30084 290 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 FOXR1Q6PIV2 292 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 RHOT2Q8IXI1 618 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 PIK3R5Q8WYR1 880 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
PHTF1-201ENST00000357783 CELF4Q9BZC1 486 aaKnown RBP17.09■□□□□ 0.33
PHTF1-201ENST00000357783 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
PHTF1-201ENST00000357783 CYP39A1Q9NYL5 469 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 TMOD4Q9NZQ9 345 aa17.09■□□□□ 0.33
PHTF1-201ENST00000357783 NOCTQ9UK39 431 aaKnown RBP17.09■□□□□ 0.33
PHTF1-201ENST00000357783 MYH9P35579 1960 aaKnown RBP17.09■□□□□ 0.33
PHTF1-201ENST00000357783 HNRNPDLO14979 420 aaKnown RBP17.08■□□□□ 0.33
PHTF1-201ENST00000357783 TTI1O43156 1089 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 ATMINO43313 823 aaPredicted RBP17.08■□□□□ 0.33
PHTF1-201ENST00000357783 DLATP10515 647 aaKnown RBP17.08■□□□□ 0.33
PHTF1-201ENST00000357783 PRKCEQ02156 737 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 CUL1Q13616 776 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 TAS1R2Q8TE23 839 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 SPIRE2Q8WWL2 714 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 ALG3Q92685 438 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 FAM84AQ96KN4 292 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 SLC9A2Q9UBY0 812 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 ALG6Q9Y672 507 aa17.08■□□□□ 0.33
PHTF1-201ENST00000357783 SRCAPQ6ZRS2 3230 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 ZNF233A6NK53 670 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 FZD9O00144 591 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 PMM2O15305 246 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 MAFGO15525 162 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 OAZ1P54368 228 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 MFAP3P55082 362 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 ACTR2P61160 394 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 GPC5P78333 572 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 KCTD16Q68DU8 428 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 BICD1Q96G01 975 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 SLITRK6Q9H5Y7 841 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 ACAD9Q9H845 621 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 XPNPEP1Q9NQW7 623 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 ADAMTS5Q9UNA0 930 aa17.08■□□□□ 0.32
PHTF1-201ENST00000357783 RTN2O75298 545 aa17.07■□□□□ 0.32
PHTF1-201ENST00000357783 MMEP08473 750 aa17.07■□□□□ 0.32
PHTF1-201ENST00000357783 COPB2P35606 906 aa17.07■□□□□ 0.32
PHTF1-201ENST00000357783 PRKG1Q13976 671 aa17.07■□□□□ 0.32
PHTF1-201ENST00000357783 SH2D3CQ8N5H7 860 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms