RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ALDH2P05091 517 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 ERCC5P28715 1186 aaPredicted RBP9.98□□□□□ -0.81
UPF2-202ENST00000357604 NPEPPSP55786 919 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 MORC3Q14149 939 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 SNX17Q15036 470 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 GJA10Q969M2 543 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 NT5C1BQ96P26 610 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 RNPEPQ9H4A4 650 aa9.98□□□□□ -0.81
UPF2-202ENST00000357604 ACKR2O00590 384 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 ATP9AO75110 1047 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 EOMESO95936 686 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 GARTP22102 1010 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 OR1G1P47890 313 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 CCDC62Q6P9F0 684 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 RBAKQ9NYW8 714 aaPredicted RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 FAN1Q9Y2M0 1017 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 SFI1A8K8P3 1242 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 ATG7O95352 703 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 AFPP02771 609 aaKnown RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 RARRES1P49788 294 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 FKBP3Q00688 224 aaKnown RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 CEP57Q86XR8 500 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 ADAM2Q99965 735 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 TRMT13Q9NUP7 481 aaKnown RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 ATP2A2P16615 1042 aaKnown RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 CCNE1P24864 410 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 CDC25AP30304 524 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 CTNNB1P35222 781 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 UBXN1Q04323 297 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 TYRO3Q06418 890 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 LIN9Q5TKA1 542 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 IPO4Q8TEX9 1081 aaKnown RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 STAMQ92783 540 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 TNFRSF25Q93038 417 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 PCIF1Q9H4Z3 704 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 PP2D1A8MPX8 630 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 SARSP49591 514 aaKnown RBP9.97□□□□□ -0.81
UPF2-202ENST00000357604 ZNF165P49910 485 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 ANO6Q4KMQ2 910 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 ZNF667Q5HYK9 610 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 FAM213AQ9BRX8 229 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 RUSC1Q9BVN2 902 aa9.97□□□□□ -0.81
UPF2-202ENST00000357604 NR3C1P04150 777 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 THP07101 528 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 TBXAS1P24557 533 aaPredicted RBP9.96□□□□□ -0.81
UPF2-202ENST00000357604 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.81
UPF2-202ENST00000357604 DUOXA2Q1HG44 320 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 TADA2BQ86TJ2 420 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 KLHDC9Q8NEP7 349 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 PHOSPHO2Q8TCD6 241 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 TRPV6Q9H1D0 765 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 GOLGA8FQ08AF8 430 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 GOLGA8DPQ0D2H9 430 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 HYIQ5T013 277 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 PPP2R2DQ66LE6 453 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 SLC24A5Q71RS6 500 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 MICALL1Q8N3F8 863 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 TRIM62Q9BVG3 475 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 ST3GAL5Q9UNP4 418 aa9.96□□□□□ -0.81
UPF2-202ENST00000357604 UMODL1Q5DID0 1318 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.96□□□□□ -0.82
UPF2-202ENST00000357604 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.96□□□□□ -0.82
UPF2-202ENST00000357604 OGTO15294 1046 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.82
UPF2-202ENST00000357604 NPTX2P47972 431 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 IFI16Q16666 785 aaKnown RBP9.96□□□□□ -0.82
UPF2-202ENST00000357604 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 HAS1Q92839 578 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 TMEM117Q9H0C3 514 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 TOM1L1O75674 476 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 TOB1P50616 345 aaPredicted RBP9.96□□□□□ -0.82
UPF2-202ENST00000357604 ARPP19P56211 112 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 STX17P56962 302 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 CUL4BQ13620 913 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 MFSD5Q6N075 450 aa9.96□□□□□ -0.82
UPF2-202ENST00000357604 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.82
UPF2-202ENST00000357604 TREHO43280 583 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 DTNBO60941 627 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 CCNE2O96020 404 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 DARSP14868 501 aaKnown RBP9.95□□□□□ -0.82
UPF2-202ENST00000357604 EN2P19622 333 aaPredicted RBP9.95□□□□□ -0.82
UPF2-202ENST00000357604 EEF1GP26641 437 aaKnown RBP9.95□□□□□ -0.82
UPF2-202ENST00000357604 PDE6CP51160 858 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 MAPRE1Q15691 268 aaKnown RBP9.95□□□□□ -0.82
UPF2-202ENST00000357604 ZNF699Q32M78 642 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 ARHGAP15Q53QZ3 475 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 SRRTQ9BXP5 876 aaKnown RBP9.95□□□□□ -0.82
UPF2-202ENST00000357604 HAUS2Q9NVX0 235 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 CD52P31358 61 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 GRIK3Q13003 919 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 MYBPC2Q14324 1141 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 PAN2Q504Q3 1202 aaKnown RBP9.95□□□□□ -0.82
UPF2-202ENST00000357604 NOMO2Q5JPE7 1267 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 LRSAM1Q6UWE0 723 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 TRAPPC12Q8WVT3 735 aa9.95□□□□□ -0.82
UPF2-202ENST00000357604 FERMT1Q9BQL6 677 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms