RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 BEST2Q8NFU1 509 aa11.16□□□□□ -0.62
FXR1-202ENST00000357559 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.16□□□□□ -0.621e-10■■□□□ 12.6
FXR1-202ENST00000357559 NDEL1Q9GZM8 345 aa11.16□□□□□ -0.62
FXR1-202ENST00000357559 KLHL18O94889 574 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 FAM102AQ5T9C2 384 aaPredicted RBP11.15□□□□□ -0.62
FXR1-202ENST00000357559 C1orf54Q8WWF1 131 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
FXR1-202ENST00000357559 ANGPT2O15123 496 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 KCNN4O15554 427 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 S100A5P33763 92 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 TMEM62Q0P6H9 643 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 MEI1Q5TIA1 1274 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 APOL5Q9BWW9 433 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 EXOSC4Q9NPD3 245 aaKnown RBP11.15□□□□□ -0.62
FXR1-202ENST00000357559 FAM196BA6NMK8 535 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 IFNEQ86WN2 208 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 FAM81BQ96LP2 452 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 ACTR5Q9H9F9 607 aaPredicted RBP11.15□□□□□ -0.62
FXR1-202ENST00000357559 MARCOQ9UEW3 520 aaPredicted RBP11.15□□□□□ -0.62
FXR1-202ENST00000357559 PAGE5Q96GU1 130 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 HES6Q96HZ4 224 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 PKP3Q9Y446 797 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 SULT1E1P49888 294 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 JADE3Q92613 823 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 AIFM3Q96NN9 605 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 BCL2L14Q9BZR8 327 aa11.15□□□□□ -0.62
FXR1-202ENST00000357559 KRT38O76015 456 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 ENO3P13929 434 aaPredicted RBP11.15□□□□□ -0.63
FXR1-202ENST00000357559 CLCN6P51797 869 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 MAPRE1Q15691 268 aaKnown RBP11.15□□□□□ -0.63
FXR1-202ENST00000357559 NAALADL2Q58DX5 795 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.63
FXR1-202ENST00000357559 CDHR1Q96JP9 859 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 MAN1C1Q9NR34 630 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 PRG3Q9Y2Y8 225 aaPredicted RBP11.15□□□□□ -0.63
FXR1-202ENST00000357559 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 SURF1Q15526 300 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 DALRD3Q5D0E6 543 aaKnown RBP11.15□□□□□ -0.63
FXR1-202ENST00000357559 STAG2Q8N3U4 1231 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 BRIP1Q9BX63 1249 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 CPVLQ9H3G5 476 aa11.15□□□□□ -0.63
FXR1-202ENST00000357559 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.63
FXR1-202ENST00000357559 DDX5P17844 614 aaKnown RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 MTM1Q13496 603 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 RARS2Q5T160 578 aaKnown RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 PI16Q6UXB8 463 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 ARHGEF25Q86VW2 580 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 TYK2P29597 1187 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 SERPINB10P48595 397 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 NCAPHQ15003 741 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 EFHBQ8N7U6 833 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 AK8Q96MA6 479 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 MMP19Q99542 508 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 USP44Q9H0E7 712 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 MAGEF1Q9HAY2 307 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 CYP26B1Q9NR63 512 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 SERPINB13Q9UIV8 391 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 PHLPP2Q6ZVD8 1323 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 UGGT2Q9NYU1 1516 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 PMS2P54278 862 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 MAPK6Q16659 721 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 ANO5Q75V66 913 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 SH3GL3Q99963 347 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 BBS2Q9BXC9 721 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 NPHS2Q9NP85 383 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 C21orf2O43822 256 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 BTBD8Q5XKL5 378 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 LMBRD2Q68DH5 695 aaPredicted RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 SLC25A41Q8N5S1 370 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 RMDN3Q96TC7 470 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 NDST4Q9H3R1 872 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 ZHX2Q9Y6X8 837 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 POTEMA6NI47 508 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 NFIBO00712 420 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 C2CD2LO14523 706 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 HAUS5O94927 633 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 MMP1P03956 469 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 ETFBP38117 255 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 SESN2P58004 480 aaPredicted RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 CCDC92Q53HC0 331 aaPredicted RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 ZNF564Q8TBZ8 553 aaPredicted RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 ACAP3Q96P50 834 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 CD274Q9NZQ7 290 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 POLR3AO14802 1390 aaPredicted RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 ESYT3A0FGR9 886 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 TWF1Q12792 350 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 FUT11Q495W5 492 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 EFHC2Q5JST6 749 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 C2orf69Q8N8R5 385 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
FXR1-202ENST00000357559 PPP6R2O75170 966 aa11.14□□□□□ -0.63
FXR1-202ENST00000357559 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms