RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DHTKD1Q96HY7 919 aaPredicted RBP27.82■■■□□ 2.04
SSBP3-202ENST00000357475 IFIH1Q9BYX4 1025 aaKnown RBP27.82■■■□□ 2.04
SSBP3-202ENST00000357475 GBP3Q9H0R5 595 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 EXOC7Q9UPT5 735 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 PIN4Q9Y237 131 aaKnown RBP27.82■■■□□ 2.04
SSBP3-202ENST00000357475 GPR182O15218 404 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 CSF2RAP15509 400 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 CCNE1P24864 410 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 ABCD1P33897 745 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 TMEM132AQ24JP5 1023 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 ZPBP2Q6X784 338 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 EEF2KMTQ96G04 330 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 CBWD1Q9BRT8 395 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 PTPRHQ9HD43 1115 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 AGPAT3Q9NRZ7 376 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 TYW1Q9NV66 732 aaKnown RBP27.81■■■□□ 2.04
SSBP3-202ENST00000357475 ANKFY1Q9P2R3 1169 aa27.81■■■□□ 2.04
SSBP3-202ENST00000357475 CXCL10P02778 98 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 PROZP22891 400 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 PLEKHG4Q58EX7 1191 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 MFSD5Q6N075 450 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 TTI2Q6NXR4 508 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 ZBTB33Q86T24 672 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 USP38Q8NB14 1042 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 DBF4BQ8NFT6 615 aa27.8■■■□□ 2.04
SSBP3-202ENST00000357475 DUSP9Q99956 384 aaKnown RBP27.8■■■□□ 2.04
SSBP3-202ENST00000357475 A0A1B0GUA9 196 aa27.79■■■□□ 2.04
SSBP3-202ENST00000357475 KIF20AO95235 890 aa27.79■■■□□ 2.04
SSBP3-202ENST00000357475 BADQ92934 168 aa27.79■■■□□ 2.04
SSBP3-202ENST00000357475 PCIF1Q9H4Z3 704 aa27.79■■■□□ 2.04
SSBP3-202ENST00000357475 TNFSF13BQ9Y275 285 aa27.79■■■□□ 2.04
SSBP3-202ENST00000357475 PDXKO00764 312 aa27.78■■■□□ 2.04
SSBP3-202ENST00000357475 HARSP12081 509 aaKnown RBP27.78■■■□□ 2.04
SSBP3-202ENST00000357475 PCBP1Q15365 356 aaKnown RBP eCLIP27.78■■■□□ 2.041e-6■■■■□ 22.1
SSBP3-202ENST00000357475 UBXN11Q5T124 520 aa27.78■■■□□ 2.04
SSBP3-202ENST00000357475 LINC01599Q8WXQ3 324 aa27.78■■■□□ 2.04
SSBP3-202ENST00000357475 EIF2AQ9BY44 585 aaKnown RBP27.78■■■□□ 2.04
SSBP3-202ENST00000357475 PRKAG2Q9UGJ0 569 aa27.78■■■□□ 2.04
SSBP3-202ENST00000357475 DACH1Q9UI36 760 aa27.78■■■□□ 2.04
SSBP3-202ENST00000357475 RWDD2AQ9UIY3 292 aa27.78■■■□□ 2.04
SSBP3-202ENST00000357475 TRAF3IP3Q9Y228 551 aa27.78■■■□□ 2.04
SSBP3-202ENST00000357475 TOM1L1O75674 476 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 PPP1R2P41236 205 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 DSC3Q14574 896 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 SEZ6Q53EL9 994 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 RTN4RL1Q86UN2 441 aaPredicted RBP27.77■■■□□ 2.04
SSBP3-202ENST00000357475 CDT1Q9H211 546 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 TSPY26PQ9H489 355 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 STYXL1Q9Y6J8 313 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 TNRC18O15417 2968 aaPredicted RBP27.77■■■□□ 2.04
SSBP3-202ENST00000357475 ERCC5P28715 1186 aaPredicted RBP27.77■■■□□ 2.04
SSBP3-202ENST00000357475 ZNF568Q3ZCX4 644 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 ZBTB41Q5SVQ8 909 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 NOTUMQ6P988 496 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 MPZL3Q6UWV2 235 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 CEP120Q8N960 986 aa27.77■■■□□ 2.04
SSBP3-202ENST00000357475 MICAL3Q7RTP6 2002 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 A0A0B4J269 797 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 NPTXRO95502 500 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 NR3C1P04150 777 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 ACRP10323 421 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 MATR3P43243 847 aaKnown RBP eCLIP27.76■■■□□ 2.033e-6■■■□□ 14.6
SSBP3-202ENST00000357475 CYP2J2P51589 502 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 ARMCX5Q6P1M9 558 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 HS2ST1Q7LGA3 356 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 POMGNT1Q8WZA1 660 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 SAAL1Q96ER3 474 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 TCHPQ9BT92 498 aa27.76■■■□□ 2.03
SSBP3-202ENST00000357475 N4BP3O15049 544 aa27.75■■■□□ 2.03
SSBP3-202ENST00000357475 AXLP30530 894 aa27.75■■■□□ 2.03
SSBP3-202ENST00000357475 MCL1Q07820 350 aa27.75■■■□□ 2.03
SSBP3-202ENST00000357475 NCBP1Q09161 790 aaKnown RBP27.75■■■□□ 2.03
SSBP3-202ENST00000357475 TWF2Q6IBS0 349 aaKnown RBP27.75■■■□□ 2.03
SSBP3-202ENST00000357475 GAS2L3Q86XJ1 694 aa27.75■■■□□ 2.03
SSBP3-202ENST00000357475 TMEM199Q8N511 208 aa27.75■■■□□ 2.03
SSBP3-202ENST00000357475 SEPT8Q92599 483 aa27.75■■■□□ 2.03
SSBP3-202ENST00000357475 ADAM2Q99965 735 aa27.75■■■□□ 2.03
SSBP3-202ENST00000357475 GOLGA8IPA6NC78 632 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 GOLGA8JA6NMD2 632 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 CLDN3O15551 220 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 CALUO43852 315 aaPredicted RBP27.74■■■□□ 2.03
SSBP3-202ENST00000357475 FAM189A1O60320 539 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 PARNO95453 639 aaKnown RBP27.74■■■□□ 2.03
SSBP3-202ENST00000357475 RFC2P35250 354 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 ZNF165P49910 485 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 LRRC63Q05C16 580 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 SLC27A1Q6PCB7 646 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 LRRC55Q6ZSA7 311 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 DHX40Q8IX18 779 aaKnown RBP27.74■■■□□ 2.03
SSBP3-202ENST00000357475 MSTO1Q9BUK6 570 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 CBX8Q9HC52 389 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 DMAC2Q9NW81 257 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 HSPBP1Q9NZL4 362 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 HES2Q9Y543 173 aa27.74■■■□□ 2.03
SSBP3-202ENST00000357475 CAPN15O75808 1086 aa27.73■■■□□ 2.03
SSBP3-202ENST00000357475 CASP4P49662 377 aa27.73■■■□□ 2.03
SSBP3-202ENST00000357475 EPHB4P54760 987 aa27.73■■■□□ 2.03
SSBP3-202ENST00000357475 NOLC1Q14978 699 aaKnown RBP eCLIP27.73■■■□□ 2.03
SSBP3-202ENST00000357475 C16orf59Q7L2K0 433 aa27.73■■■□□ 2.03
SSBP3-202ENST00000357475 TMEM192Q8IY95 271 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms